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SCNpilot_cont_1000_p_scaffold_4332

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4332_1
unknown

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comp(110..271)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4332_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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609..3230
DNA (2622bp) protein (874aa)
TPR repeat n=1 Tax=Nitrosospira sp. APG3 PF4_9PROT">RepID=M5DPF4_9PROT rbh
TPR repeat {ECO:0000313|EMBL:CCU61320.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
tetratricopeptide repeat protein,methyltransferase family protein rbh
SCNpilot_cont_1000_p_scaffold_4332_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3285..3737)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DE8FAB
host cell attachment-required protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
SCNpilot_cont_1000_p_scaffold_4332_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4241..7402)
DNA (3162bp) protein (1054aa)
Multidrug efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHC4_9BACT rbh
multidrug efflux transporter rbh
Multidrug efflux transporter {ECO:0000313|EMBL:CBK42661.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
SCNpilot_cont_1000_p_scaffold_4332_5
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7415..8605)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZP87_9PSED rbh
AcrA {ECO:0000313|EMBL:EYR69767.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
multidrug efflux transporter, membrane fusion protein rbh
SCNpilot_cont_1000_p_scaffold_4332_6
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8788..9159
DNA (372bp) protein (124aa)
MerR family transcriptional regulator n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A5Z6_9PSED
MerR family transcriptional regulator {ECO:0000313|EMBL:ERO65886.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMAA1215.;"
soxR-2; redox-sensitive transcriptional activator SoxR 2
Displaying 6 items

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