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SCNpilot_cont_1000_p_scaffold_3249

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3249_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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522..743
DNA (222bp) protein (74aa)
Dodecin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
Transporter {ECO:0000313|EMBL:KIO50058.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09165 hypothetical protein
SCNpilot_cont_1000_p_scaffold_3249_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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964..1566
DNA (603bp) protein (201aa)
maltose O-acetyltransferase; K00661 maltose O-acetyltransferase [EC:2.3.1.79]
Transferase hexapeptide repeat containing protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB35_9BACT
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EDY16313.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3249_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1679..2368)
DNA (690bp) protein (230aa)
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:ABB75540.1}; EC=3.4.21.92 {ECO:0000313|EMBL:ABB75540.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T1_NITMU
ATPase with chaperone activity; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
SCNpilot_cont_1000_p_scaffold_3249_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2341..3699)
DNA (1359bp) protein (453aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFW1_9PROT
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:CCU61192.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ATPase with chaperone activity; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
SCNpilot_cont_1000_p_scaffold_3249_5
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3701..4009)
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CLPS_NITMU
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000255|HAMAP-Rule:MF_00302}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3249_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..4509
DNA (204bp) protein (68aa)
Cold shock protein CspD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DP23_9PROT
Cold shock protein CspD {ECO:0000313|EMBL:CCU61190.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_1000_p_scaffold_3249_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4653..5915)
DNA (1263bp) protein (421aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446, ECO:0000313|EMBL:KIO50054.1};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
isocitrate dehydrogenase, NADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFN6_9PROT rbh
SCNpilot_cont_1000_p_scaffold_3249_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6182..6628
DNA (447bp) protein (149aa)
Nudix-like NDP and NTP phosphohydrolase YmfB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG65_9PROT
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:KIO50053.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NUDIX hydrolase
SCNpilot_cont_1000_p_scaffold_3249_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6677..7771
DNA (1095bp) protein (365aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] rbh
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=MNMA_NITMU rbh
SCNpilot_cont_1000_p_scaffold_3249_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7797..8408)
DNA (612bp) protein (204aa)
glutathione S-transferase-like protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T7_NITMU rbh
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ABB75534.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3249_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8588..9991
DNA (1404bp) protein (468aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Adenylosuccinate lyase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6T8_NITMU rbh
SCNpilot_cont_1000_p_scaffold_3249_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10144..10731
DNA (588bp) protein (196aa)
Protein GrpE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG60_9PROT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
GrpE protein; K03687 molecular chaperone GrpE
SCNpilot_cont_1000_p_scaffold_3249_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10803..12743
DNA (1941bp) protein (647aa)
Chaperone protein DnaK n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFV3_9PROT rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK rbh
SCNpilot_cont_1000_p_scaffold_3249_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..14039
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF02_9PROT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ rbh
Displaying 14 items

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