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SCNpilot_cont_1000_p_scaffold_3668

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3668_1
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG52168.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
SCNpilot_cont_1000_p_scaffold_3668_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(344..745)
DNA (402bp) protein (134aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
ATP-dependent helicase HrpA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y975_NITMU
ATP-dependent helicase {ECO:0000313|EMBL:KIO48109.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_3668_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(708..1154)
DNA (447bp) protein (149aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
Macromolecule metabolism macromolecule synthesis, modification dna-replication,repair,restriction-modification n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSR9_9PROT
Macromolecule metabolism macromolecule synthesis, modification dna-replication,repair,restriction-modification {ECO:0000313|EMBL:CCU62445.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_3668_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1177..3501)
DNA (2325bp) protein (775aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13]
Macromolecule metabolism macromolecule synthesis, modification dna-replication,repair,restriction-modification n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSR9_9PROT
Macromolecule metabolism macromolecule synthesis, modification dna-replication,repair,restriction-modification {ECO:0000313|EMBL:CCU62445.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_3668_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3813..3989
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIG3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62444.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_3668_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5613)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y978_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB74693.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3668_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5930..7642
DNA (1713bp) protein (571aa)
peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.96) id=7718591 bin=BACIGN_2 species=Prevotella stercorea genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:CCH76933.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
peptidase S8/S53 subtilisin kexin sedolisin
SCNpilot_cont_1000_p_scaffold_3668_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7664..11077
DNA (3414bp) protein (1138aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035C2C56 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU60468.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_3668_9
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

11137..14517
DNA (3381bp) protein (1127aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003763279 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ90844.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3668_10
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14539..16725
DNA (2187bp) protein (729aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037C0D12 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ91499.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCNpilot_cont_1000_p_scaffold_3668_11
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

16722..19916
DNA (3195bp) protein (1065aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00037C0D12
Uncharacterized protein {ECO:0000313|EMBL:CCQ90843.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3668_12
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19913..22834
DNA (2922bp) protein (974aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI0003604204 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKV01582.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
hypothetical protein rbh
Displaying 12 items

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