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SCNpilot_cont_1000_p_scaffold_3744

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3744_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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91..2514
DNA (2424bp) protein (808aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU61309.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU61309.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU61309.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFW8_9PROT rbh
SCNpilot_cont_1000_p_scaffold_3744_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2550..2759
DNA (210bp) protein (70aa)
Copper ion binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPE8_9PROT
Copper ion binding protein {ECO:0000313|EMBL:CCU61310.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal transport/detoxification protein
SCNpilot_cont_1000_p_scaffold_3744_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2734..3051
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF28_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61311.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3744_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3245..4027
DNA (783bp) protein (261aa)
Probable cytochrome c2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG52_9PROT rbh
Cytochrome C553 {ECO:0000313|EMBL:KIO47859.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c rbh
SCNpilot_cont_1000_p_scaffold_3744_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4024..5355
DNA (1332bp) protein (444aa)
Putative diheme cytochrome c-553 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH4_9PROT rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIO47840.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I rbh
SCNpilot_cont_1000_p_scaffold_3744_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5395..6561)
DNA (1167bp) protein (389aa)
Sulfate transporter family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY1_9PROT
Sulfate transporter {ECO:0000313|EMBL:KIO50181.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate transporter
SCNpilot_cont_1000_p_scaffold_3744_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7279..9534)
DNA (2256bp) protein (752aa)
TonB-dependent receptor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK0_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCU62902.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_p_scaffold_3744_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..9809
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48172.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_3744_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9968..10474)
DNA (507bp) protein (169aa)
Cupin domain protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK32_9PROT
Cupin domain protein {ECO:0000313|EMBL:CCU62898.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cupin
Displaying 9 items

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