name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_1155_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(69..521)
|
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216, ECO:0000313|EMBL:KIO49402.1}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Flavodoxin-like fold subfamily; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZN0_9GAMM
|
|
SCNpilot_cont_1000_p_scaffold_1155_2
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(621..851)
|
YceI family protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZN1_9GAMM
YceI family protein {ECO:0000313|EMBL:EGW20403.1}; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
YceI family protein
|
|
SCNpilot_cont_1000_p_scaffold_1155_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
958..1869
|
Transcriptional regulator, LysR family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZM9_9GAMM
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIO49401.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2062..2427)
|
5'-nucleotidase id=1352865 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_cont_1000_p_scaffold_1155_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2424..3836)
|
5'-nucleotidase id=1352866 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
SCNpilot_cont_1000_p_scaffold_1155_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3979..5337)
|
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HPP7_PSEST
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM77352.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5844..7148
|
Short chain amide porin n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N1_NITMU
rbh
hypothetical protein
rbh
Short chain amide porin {ECO:0000313|EMBL:ABB74540.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_1155_8
unknown
|
Not on your lists |
comp(7418..7753)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_1155_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7943..8227
|
Urease accessory protein UreD n=1 Tax=Nitrosospira sp. NpAV RepID=Q7BBX8_9PROT
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384, ECO:0000313|EMBL:KIO47796.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
urease accessory protein UreD; K03190 urease accessory protein
|
|
SCNpilot_cont_1000_p_scaffold_1155_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8335..8637
|
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Urease subunit gamma n=1 Tax=Nitrosospira sp. NpAV RepID=Q8GBA9_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_1155_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8652..8975
|
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954, ECO:0000313|EMBL:KIO47819.1}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954, ECO:0000256|SAAS:SAAS00108778};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Urease subunit beta n=1 Tax=Nitrosospira sp. NpAV RepID=Q8GH76_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_1155_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9015..10721
|
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Urease subunit alpha n=1 Tax=Nitrosospira sp. NpAV RepID=Q8GH75_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_13
unknown
|
Not on your lists |
comp(10746..11243)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_1155_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11285..11962
|
Urease accessory protein UreF n=1 Tax=Nitrosospira sp. NpAV RepID=Q8GH73_9PROT
rbh
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
urease accessory protein ureF; K03188 urease accessory protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_15
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12043..12642
|
Urease accessory protein UreG n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZD05_9PROT
rbh
urease accessory protein ureG; K03189 urease accessory protein
rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
|
|
SCNpilot_cont_1000_p_scaffold_1155_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12763..13719
|
Urea transporter n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZD04_9PROT
rbh
Urea transporter {ECO:0000313|EMBL:KIO47922.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
urea transporter; K08717 urea transporter
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13814..14449)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N3_NITMU
rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIO48978.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
two component LuxR family transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14615..16585)
|
periplasmic sensor signal transduction histidine kinase; K07675 two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N2_NITMU
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16932..17270
|
MutT-like protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJR7_9PROT
MutT-like protein {ECO:0000313|EMBL:CCU62728.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
NUDIX hydrolase
|
|
SCNpilot_cont_1000_p_scaffold_1155_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17526..18779
|
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Glutamyl-tRNA reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLU3_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18776..19852
|
Peptide chain release factor 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL32_9PROT
rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:KIO49738.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19795..20850
|
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
rbh
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospir
Release factor glutamine methyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5P4_NITMU
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20963..21271
|
Glutaredoxin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJQ8_9PROT
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glutaredoxin-like protein; K07390 monothiol glutaredoxin
|
|
SCNpilot_cont_1000_p_scaffold_1155_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21390..21812)
|
Putative membrane protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL60_9PROT
Putative membrane protein {ECO:0000313|EMBL:CCU63662.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1155_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22003..22746
|
Coenzyme PQQ synthesis C n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5P8_NITMU
rbh
Coenzyme PQQ synthesis C {ECO:0000313|EMBL:ABB75923.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_1155_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22838..23752)
|
Transcriptional activator MetR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJQ6_9PROT
rbh
Transcriptional activator MetR {ECO:0000313|EMBL:CCU62987.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
LysR family transcriptional regulator; K03576 LysR family transcriptional regulator, regulator for metE and metH
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23869..26208
|
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitr
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHY9_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26194..28803)
|
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJP9_9PROT
rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_cont_1000_p_scaffold_1155_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28891..29691)
|
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:KIO50132.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Methionine aminopeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKB4_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1155_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29779..30414)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI12_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50133.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|