name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_1564_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..204
|
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
3-dehydroquinate dehydratase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH11_NITSI
|
|
SCNpilot_cont_1000_p_scaffold_1564_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
407..868
|
Biotin carboxyl carrier protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D1_NITMU
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABB76040.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_1564_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
933..2288
|
Biotin carboxylase of acetyl-CoA carboxylase {ECO:0000313|EMBL:CCU61914.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CCU61914.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
rbh
Biotin carboxylase of acetyl-CoA carboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH98_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2485..3324
|
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
rbh
Ribosomal protein L11 methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHQ7_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_5
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3955..4341
|
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E09288
hypothetical protein
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
|
|
SCNpilot_cont_1000_p_scaffold_1564_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4635..5447
|
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D5_NITMU
rbh
ABC transporter-like protein; K02065 putative ABC transport system ATP-binding protein
rbh
ABC transporter related protein {ECO:0000313|EMBL:ABB76036.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_1564_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5440..6237
|
Uncharacterized ABC transporter, permease component YrbE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR50_9PROT
rbh
ABC transporter permease {ECO:0000313|EMBL:KIO48764.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K02066 putative ABC transport system permease protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6237..6719
|
Uncharacterized ABC transporter, periplasmic component YrbD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH94_9PROT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIO48765.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
|
|
SCNpilot_cont_1000_p_scaffold_1564_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6798..7442
|
Toluene tolerance n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5D8_NITMU
rbh
Signal peptide protein {ECO:0000313|EMBL:KIO48766.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
toluene tolerance; K07323 putative toluene tolerance protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7447..7749
|
STAS domain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE5_9PROT
Anti-sigma-factor antagonist protein {ECO:0000313|EMBL:KIO48767.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
anti-sigma-factor antagonist domain-containing protein; K07122
|
|
SCNpilot_cont_1000_p_scaffold_1564_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7904..8152
|
YrbA protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH89_9PROT
YrbA protein {ECO:0000313|EMBL:CCU61904.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
BolA-like protein
|
|
SCNpilot_cont_1000_p_scaffold_1564_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8193..9041)
|
RNA polymerase sigma factor RpoH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE0_9PROT
rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9158..10030)
|
Cell division protein FtsX n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG3_9PROT
rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K09811 cell division transport system permease protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10063..10716)
|
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR41_9PROT
rbh
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) {ECO:0000313|EMBL:CCU61900.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ABC transporter-like protein; K09812 cell division transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10771..11766)
|
Signal recognition particle receptor FtsY n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH87_9PROT
rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12041..13513
|
FIG015547: peptidase, M16 family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP8_9PROT
rbh
Peptidase M16 {ECO:0000313|EMBL:KIO48831.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_1564_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13652..15010
|
FIG015287: Zinc protease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD8_9PROT
rbh
Zinc protease {ECO:0000313|EMBL:KIO48775.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_1564_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15230..15637
|
16S rRNA (Guanine(966)-N(2))-methyltransferase ## SSU rRNA m(2)G966 {ECO:0000313|EMBL:CCU61896.1}; EC=2.1.1.171 {ECO:0000313|EMBL:CCU61896.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
16S rRNA (Guanine(966)-N(2))-methyltransferase ## SSU rRNA m(2)G966 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG2_9PROT
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1564_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15630..16133
|
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR36_9PROT
|
|
SCNpilot_cont_1000_p_scaffold_1564_20
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16144..16395
|
Ferredoxin n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JRT4_9GAMM
Ferredoxin {ECO:0000313|EMBL:ESQ15000.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
fdx; ferredoxin
|
|
SCNpilot_cont_1000_p_scaffold_1564_21
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16432..17187)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP3_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48779.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K06997
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_22
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17306..20788)
|
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
rbh
DNA polymerase III alpha subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD5_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20960..22429)
|
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGI4_9PROT
rbh
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein {ECO:0000313|EMBL:CCU61594.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_24
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22551..22907)
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61595.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K09806 hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1564_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23035..24036
|
COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF85_9PROT
rbh
COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases {ECO:0000313|EMBL:CCU61596.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
aminoglycoside phosphotransferase; K07102
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_26
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24056..24781
|
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CCU61597.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CCU61597.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGR2_9PROT
rbh
nucleotidyl transferase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_27
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24982..26301
|
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CCU61598.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CCU61598.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Xaa-Pro aminopeptidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH17_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_1564_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26306..26713
|
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT3_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KIO49574.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_1000_p_scaffold_1564_29
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26824..28137
|
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
rbh
2-octaprenyl-6-methoxyphenol hydroxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQ69_9PROT
rbh
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:CCU61600.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_cont_1000_p_scaffold_1564_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28655..29668
|
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-]
rbh
tRNA-dihydrouridine synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF86_9PROT
rbh
|