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SCNpilot_cont_1000_p_scaffold_1971

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1971_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..731
DNA (729bp) protein (243aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKN0_9PROT
RND transporter {ECO:0000313|EMBL:KIO48129.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
AcrB/AcrD/AcrF family protein
SCNpilot_cont_1000_p_scaffold_1971_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

810..1628
DNA (819bp) protein (273aa)
UDP-galactose-lipid carrier transferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIH1_9PROT rbh
Polyphosphate kinase {ECO:0000313|EMBL:KIO48242.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1971_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1933..2514
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIZ1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62453.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1971_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..6818)
DNA (4182bp) protein (1394aa)
Acriflavin resistance protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPH2_METS0
RND transporter {ECO:0000313|EMBL:KIO48846.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
acriflavin resistance protein
SCNpilot_cont_1000_p_scaffold_1971_5
unknown

Not on your lists

comp(6907..7305)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1971_6
unknown

Not on your lists

comp(7385..7642)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1971_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8430..10397
DNA (1968bp) protein (656aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] rbh
DinG family ATP-dependent helicase YoaA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRY7_9PROT rbh
Helicase {ECO:0000313|EMBL:KIO48251.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_1971_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10573..11955)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Copper sensory histidine kinase CpxA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI98_9PROT rbh
Signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_1971_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11952..12647)
DNA (696bp) protein (232aa)
Copper-sensing two-component system response regulator CpxR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI07_9PROT rbh
Copper-sensing two-component system response regulator CpxR {ECO:0000313|EMBL:CCU62152.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
two comoponent transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR
SCNpilot_cont_1000_p_scaffold_1971_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12869..13360
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG02_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62151.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1971_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..14482)
DNA (1053bp) protein (351aa)
Alternate gene name: yukI n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRX3_9PROT rbh
Alternate gene name: yukI {ECO:0000313|EMBL:CCU62150.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1971_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14836..17994)
DNA (3159bp) protein (1053aa)
Adenylate cyclase / Guanylate cyclase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DRX9_9PROT rbh
Transcriptional regulator {ECO:0000313|EMBL:KIO48254.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_1971_13
unknown

Not on your lists

18312..18440
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1971_14
unknown

Not on your lists

18437..18637
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1971_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18828..19436
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K9_NITMU rbh
TetR family transcriptional regulator rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB75262.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_1971_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19513..19812
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K8_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75263.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_1971_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19858..21156
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K7_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75264.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_1971_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21143..21499
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7K7_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75264.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying 18 items

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