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SCNpilot_cont_1000_p_scaffold_7913

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7913_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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898..1689
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU4_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU63539.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_7913_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1942..2331
DNA (390bp) protein (130aa)
COGs COG0226 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW38_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49069.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7913_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2312..2812
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJE2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63541.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7913_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2805..3290
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJE2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49011.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_7913_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3302..6232
DNA (2931bp) protein (977aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKW8_9PROT rbh
Diguanylate cyclase {ECO:0000313|EMBL:KIO49010.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_1000_p_scaffold_7913_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6317..7678)
DNA (1362bp) protein (454aa)
Putative sensory histidine kinase YfhA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK59_9PROT rbh
Putative sensory histidine kinase YfhA {ECO:0000313|EMBL:CCU63172.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
two component sigma-54 specific Fis family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_7913_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7689..9593)
DNA (1905bp) protein (635aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
periplasmic sensor signal transduction histidine kinase; K07711 two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] rbh
Putative sensor-like histidine kinase YfhK n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUZ1_9PROT rbh
Displaying 7 items

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