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SCNpilot_cont_1000_p_scaffold_12638

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_12638_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..729
DNA (729bp) protein (243aa)
Glycerate dehydrogenase {ECO:0000313|EMBL:CCU62576.1}; EC=1.1.1.29 {ECO:0000313|EMBL:CCU62576.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
D-isomer specific 2-hydroxyacid dehydrogenase; K00018 glycerate dehydrogenase [EC:1.1.1.29] rbh
Glycerate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH06_9PROT rbh
SCNpilot_cont_1000_p_scaffold_12638_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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964..1383
DNA (420bp) protein (140aa)
Rubrerythrin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIW0_9PROT
Rubrerythrin {ECO:0000313|EMBL:KIO47884.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
rubrerythrin
SCNpilot_cont_1000_p_scaffold_12638_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1498..2826
DNA (1329bp) protein (443aa)
Fe-S oxidoreductase-like protein in Rubrerythrin cluster n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA0_9PROT rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:KIO47883.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putative ferredoxin rbh
SCNpilot_cont_1000_p_scaffold_12638_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2891..3469
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIR9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO47882.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_12638_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3482..4054
DNA (573bp) protein (191aa)
Putative lipoprotein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT56_9PROT
Putative lipoprotein {ECO:0000313|EMBL:CCU62580.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative lipoprotein
SCNpilot_cont_1000_p_scaffold_12638_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4430..4762)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIW4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO47880.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_12638_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4790..5851)
DNA (1062bp) protein (354aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
Glutamate 5-kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJA3_9PROT rbh
SCNpilot_cont_1000_p_scaffold_12638_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6122..6520)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y803_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75118.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_12638_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6517..7362)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y804_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75117.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_12638_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7374..7886)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y805_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75116.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_12638_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7895..8116)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y806_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB75115.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_12638_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8323..9006)
DNA (684bp) protein (228aa)
GTPase Obg n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT63_9PROT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
obgE; GTPase ObgE; K03979 GTP-binding protein
SCNpilot_cont_1000_p_scaffold_12638_13
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9079..9339)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEE7_NITSI
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
SCNpilot_cont_1000_p_scaffold_12638_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9352..9663)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIW7_9PROT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Displaying 14 items

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