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SCNpilot_cont_1000_p_scaffold_10850

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_10850_1
unknown

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341..985
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_10850_2
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1863..3101
DNA (1239bp) protein (413aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS domain S-box n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEL1_9BRAD
SCNpilot_cont_1000_p_scaffold_10850_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3091..5028
DNA (1938bp) protein (646aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034DB72E rbh
signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_10850_4
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4994..5893
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003485EDC rbh
diguanylate cyclase (GGDEF) domain-containing protein
Tax=GWC2_Geobacteraceae_53_11_curated
SCNpilot_cont_1000_p_scaffold_10850_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6245..7051
DNA (807bp) protein (269aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHI4_9PROT rbh
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CCU61957.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
transcriptional regulator-like protein
SCNpilot_cont_1000_p_scaffold_10850_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7359..9725
DNA (2367bp) protein (789aa)
TonB-dependent receptor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH6_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCU61318.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-dependent receptor protein
SCNpilot_cont_1000_p_scaffold_10850_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10971..12752)
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B200D
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
Displaying 7 items

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