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SCNpilot_cont_1000_p_scaffold_5130

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5130_1
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(62..937)
DNA (876bp) protein (292aa)
Cation efflux protein id=1353825 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cation transporter
Tax=GWA2_Gallionellales_60_142_curated
SCNpilot_cont_1000_p_scaffold_5130_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1036..2286
DNA (1251bp) protein (417aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP synthase subunit beta 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ATPB2_NITMU rbh
SCNpilot_cont_1000_p_scaffold_5130_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2258..2695
DNA (438bp) protein (146aa)
F0F1 ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
H+-transporting two-sector ATPase, delta/epsilon subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8G3_NITMU
H+-transporting two-sector ATPase, delta/epsilon subunit {ECO:0000313|EMBL:ABB74958.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_5130_4
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2688..3158
DNA (471bp) protein (157aa)
F0F1-ATPase subunit, putative n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8G4_NITMU
F0F1-ATPase subunit; K02116 ATP synthase protein I
F0F1-ATPase subunit, putative {ECO:0000313|EMBL:ABB74957.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_5130_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3235..3564
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8G5_NITMU
ATPase F0F1 {ECO:0000313|EMBL:KIO48525.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5130_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3565..4269
DNA (705bp) protein (235aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
ATP synthase subunit a n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ATP6_NITMU rbh
ATP synthase subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000255|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000255|HAMAP-Rule:MF_01393}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_5130_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4346..4627
DNA (282bp) protein (94aa)
F0F1 ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase C chain n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHY3_9PROT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_5130_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4631..5530
DNA (900bp) protein (300aa)
H+-transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] rbh
ATP synthase subunit b 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) PF2_NITMU">RepID=ATPF2_NITMU rbh
ATP synthase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I 2 {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b 2 {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_5130_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5527..7095
DNA (1569bp) protein (523aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] rbh
ATP synthase subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha 2 {ECO:0000255|HAMAP-Rule:MF_01346}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP synthase subunit alpha 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=ATPA2_NITMU rbh
SCNpilot_cont_1000_p_scaffold_5130_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7139..8038
DNA (900bp) protein (300aa)
H+-transporting two-sector ATPase subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
H+-transporting two-sector ATPase, gamma subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8H0_NITMU rbh
H+-transporting two-sector ATPase, gamma subunit {ECO:0000313|EMBL:ABB74951.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_5130_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8146..8895
DNA (750bp) protein (250aa)
Sodium-dependent transporter n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS26_9PROT rbh
Sodium-dependent transporter {ECO:0000313|EMBL:CCU62190.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
putative protein ybaS
Displaying 11 items

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