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SCNpilot_cont_1000_p_scaffold_5862

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5862_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1224
DNA (1224bp) protein (408aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6) rbh
FIG071646: Sugar transferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHA0_9PROT rbh
FIG071646: Sugar transferase {ECO:0000313|EMBL:CCU61837.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_p_scaffold_5862_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1241..3328
DNA (2088bp) protein (696aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KIO48822.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Sensory transduction histidine kinases n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFD9_9PROT rbh
periplasmic sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_5862_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3542..4909
DNA (1368bp) protein (456aa)
Response regulatory protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH39_9PROT rbh
Response regulatory protein {ECO:0000313|EMBL:CCU61834.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
two component sigma-54 specific Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator rbh
SCNpilot_cont_1000_p_scaffold_5862_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4968..6551
DNA (1584bp) protein (528aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHK4_9PROT rbh
Acyl--CoA ligase {ECO:0000313|EMBL:KIO48824.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
AMP-dependent synthetase and ligase rbh
SCNpilot_cont_1000_p_scaffold_5862_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6548..7783
DNA (1236bp) protein (412aa)
Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5L5_NITMU rbh
Diaminopimelate decarboxylase {ECO:0000313|EMBL:KIO48825.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_5862_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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7921..9786
DNA (1866bp) protein (622aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFD7_9PROT rbh
Amidotransferase {ECO:0000313|EMBL:KIO48826.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_5862_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9955..10638
DNA (684bp) protein (228aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00520 mercuric reductase [EC:1.16.1.1]
COG0398: uncharacterized membrane protein / PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH34_9PROT
COG0398: uncharacterized membrane protein / PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase {ECO:0000313|EMBL:CCU61824.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Displaying 7 items

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