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SCNpilot_cont_1000_p_scaffold_532_15

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 15090..15812

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 239.0
  • Bit_score: 412
  • Evalue 8.10e-113
  • rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 240.0
  • Bit_score: 423
  • Evalue 1.10e-115
  • rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB {ECO:0000313|EMBL:CCU61716.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 240.0
  • Bit_score: 423
  • Evalue 1.60e-115

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAGCGAGCTCAGGGCTGATGGTTTGAAGAAACGCTACAAATCCCGCACTGTTGTGCGGGATGCGTCCCTGTCAGTGACGAGCGGCGAAGTGGTCGGCCTGCTCGGCCCTAATGGCGCAGGCAAGACGACGTGCTTCTACATGATTGTAGGGTTGGTGCCGGTGGATGGCGGCAGCATTTTTCTGGATGGGCGCGATTTAAGCCAGATGCCGATGCACGAGCGCGCTCACCTGGGCTTGAGTTATCTGCCGCAGGAAGCATCGATTTTCCGGCGGCTTTCGGTGGCCGATAATATACGGGCAGTGCTCGAACTGAAGAGTTATTCCGCCGATGAAATACAGCAGCATCTTGAAGAGCTCCTGCATGATCTGCATATCAGCCATATAAGGAACAACCCTGGCATCAGCTTGTCGGGAGGGGAGCGCCGACGCGTCGAAATTGCGCGGGCACTGGCGACCAGTCCGCGTTTCATTCTGCTGGATGAGCCTTTTGCGGGTGTCGATCCTATCGCGGTCCTGGATATCCAGAAAATTATACAGTTCCTCAGGGAGCGGGAGATCGGGGTGCTCATCACCGACCATAACGTTCGGGAAACATTGGGTATCTGTGACCGGGCATACATCATCAGCGACGGCACGGTACTGGCAAGCGGCAGGCCTGATGAAATTATTTATAATGAAAATGTGAGAAAAGTATATCTGGGGGAACATTTCCGGCTTTGA
PROTEIN sequence
Length: 241
MSELRADGLKKRYKSRTVVRDASLSVTSGEVVGLLGPNGAGKTTCFYMIVGLVPVDGGSIFLDGRDLSQMPMHERAHLGLSYLPQEASIFRRLSVADNIRAVLELKSYSADEIQQHLEELLHDLHISHIRNNPGISLSGGERRRVEIARALATSPRFILLDEPFAGVDPIAVLDIQKIIQFLREREIGVLITDHNVRETLGICDRAYIISDGTVLASGRPDEIIYNENVRKVYLGEHFRL*