name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_532_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(63..1370)
|
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE1_9PROT
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KIO49531.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1367..2497)
|
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE1_9PROT
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KIO49531.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2558..2971)
|
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Acyl-CoA hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49532.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3083..4897)
|
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCU61730.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCU61730.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQP5_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5021..7465)
|
Butyryl-CoA dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGX6_9PROT
rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KIO49534.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7481..7846)
|
Transport-associated n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD6_9PROT
Transport-associated protein {ECO:0000313|EMBL:KIO49535.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
transport-associated protein
|
|
SCNpilot_cont_1000_p_scaffold_532_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8065..8946)
|
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
rbh
tRNA dimethylallyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB1_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_8
unknown
|
Not on your lists |
9108..9236
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_532_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9340..10458
|
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta {ECO:0000313|EMBL:CCU61723.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCU61723.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
rbh
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC9_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10607..11545
|
Vitamin B12 ABC transporter, B12-binding component BtuF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH19_9PROT
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIO49649.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11678..12682
|
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB0_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13329..13922
|
phosphatase kdsC (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
Phosphatase kdsC {ECO:0000313|EMBL:ABB73397.1}; EC=3.1.3.45 {ECO:0000313|EMBL:ABB73397.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Phosphatase kdsC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCX4_NITMU
|
|
SCNpilot_cont_1000_p_scaffold_532_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13919..14488
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61718.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K11719 lipopolysaccharide export system protein LptC
|
|
SCNpilot_cont_1000_p_scaffold_532_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14558..15058
|
OstA-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCX6_NITMU
OstA-like protein; K09774 lipopolysaccharide export system protein LptA
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_p_scaffold_532_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15090..15812
|
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA9_9PROT
rbh
Lipopolysaccharide ABC transporter, ATP-binding protein LptB {ECO:0000313|EMBL:CCU61716.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15856..17337
|
RNA polymerase sigma-54 factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQL5_9PROT
rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17356..17685
|
Ribosome hibernation protein YhbH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGV8_9PROT
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:KIO49545.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sigma 54 modulation protein/30S ribosomal protein S30EA; K05808 putative sigma-54 modulation protein
|
|
SCNpilot_cont_1000_p_scaffold_532_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17812..18759
|
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;
HPr kinase/phosphorylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHC1_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18879..19640
|
UPF0042 nucleotide-binding protein Nmul_A0081 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y081_NITMU
rbh
Nucleotide-binding protein SQ11_05270 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_20
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19683..20321
|
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
rbh
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFA8_9PROT
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20350..20997)
|
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY3_NITMU
5-formyltetrahydrofolate cyclo-ligase
|
|
SCNpilot_cont_1000_p_scaffold_532_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21024..22145)
|
A/G-specific DNA-adenine glycosylase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY4_NITMU
rbh
Adenine glycosylase {ECO:0000313|EMBL:KIO49549.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_p_scaffold_532_23
unknown
|
Not on your lists |
22331..22531
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_532_24
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22763..23530)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICW6_BEII9
rbh
Oxidoreductase {ECO:0000313|EMBL:KGY16328.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
short-chain dehydrogenase/reductase SDR
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_25
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23935..24537)
|
Undecaprenyl diphosphate phosphatase, putative n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDG8_GEOBB
undecaprenyl diphosphate phosphatase
Undecaprenyl diphosphate phosphatase, putative {ECO:0000313|EMBL:ACH39164.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
|
|
SCNpilot_cont_1000_p_scaffold_532_26
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24867..26810
|
DedA family n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HKF5_BURVI
rbh
DedA family {ECO:0000313|EMBL:ERJ40944.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
PA-phosphatase-like phosphoesterase
rbh
|
|
SCNpilot_cont_1000_p_scaffold_532_27
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26990..27253
|
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G907_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ39817.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative Thioredoxin/glutaredoxin
|
|
SCNpilot_cont_1000_p_scaffold_532_28
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27390..27680
|
Transcriptional regulator, MerR family n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HNN3_BURVI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ERJ39818.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
MerR family transcriptional regulator; K13638 MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
|
|
SCNpilot_cont_1000_p_scaffold_532_29
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27677..27940
|
Thioredoxin/glutaredoxin n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HH95_BURVI
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ERJ39819.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative Thioredoxin/glutaredoxin
|
|
SCNpilot_cont_1000_p_scaffold_532_30
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27930..28625
|
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G9Q4_BURVI
rbh
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:ERJ39820.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
putative Cytochrome c biogenesis protein
|