ggKbase home page

SCNpilot_cont_1000_p_scaffold_2676_5

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 7057..8901

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase:Chain length determinant protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHU3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 613.0
  • Bit_score: 846
  • Evalue 1.80e-242
  • rbh
Phage integrase:Chain length determinant protein {ECO:0000313|EMBL:CCU62072.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 613.0
  • Bit_score: 846
  • Evalue 2.50e-242
Phage integrase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 614.0
  • Bit_score: 758
  • Evalue 1.20e-216
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGGTCGGCCTGATTTACGACTACTCCCGCCCGGCCATTTACCGCAGCAGCGCCACATTGCTCACTTCCGCGATGACCCCGGTGGATCGGCAAAGCGGCGATCCCGATATCCAGCATGTTGCAATCCAGATGCAGCTGTTGCTGGGGCGCGAGCTGGCGGCGGAAACCCTGTCGCGGCTCAAAGCGGCCGACAGGTCGCTGGAAAACCTGACCATCCCGGATATACAGAATTTGCTGCAGGTGGAACCTATCCCTGAAACCAACCTCGTCGAAATCCTGGCGGAGGATACCGATCCCAAATTCCCGCCGGTACTGATCAATACCTGGATCGATGTGTACCTCGATGCCCGTGCCGCGGAAGTGAAGGAGCTGACCGGAAACACGGCGCGGATTCTGGAGAGCGAAGTCGATGACCTGGGAAACAAGGTCGAAGCTGCGCGCGAGTCACTGGAAATTTTCAGGAAGACACACGACATTTCATCCATCGAGAGGGAGGAAAACGAAGAGCTGGCGCGGCTTAAAGGCTTGAACGAATCCCTCAACAAGGCAAGCGAAGAGGAAGTGAAGGCGAGAGCCAACCTGGATGCGATCAAGTCGGCCATTTCCCGGGGCAAGGCCGTGGTCCCGGATGACGAAAAAGGCAGCCTGCTCGAACTCGAGCTGCGCATGCAGGATCTGCGCGAAAAGCTTGCGGATCTCGATAAGAAATATACCCGCGACTACATCAATCTGCATCCCGAGTTCAAGTTCATCCCCGAGCAGATAAAAGACATGGATAATGCCATTCAACGCAAGCGGCAGGATGGCAAGAACGTGGTATTGACCGATGCGGAAGTCACTTATGCCGCGGCTCGCCAGGCCGTTCGGGAGATTCGTGCCCAACTGGATGAGCATAAGCGGCGGGCCTCCGCATTTACGACCAAGTTCGCGAAACACGATGCGCTGAGAGCCGACCTGGAGAGTCTTGAACAGCTCTACCGGGAAGCCCAGGACCGGTTGATGCAGGTCAAATCGGGCCAGAGGGAAAAATATCCGCAAGTCAGTGTCATCAGTCGTGCCTACGAGCCCCGGCATCCGGTGAGCCCCGACTATCGCCATGATGCGTTGGTGGTCCTCGGCGGTTCTCTGCTGCTTGCGCTTTTTGGCGTCTGGATGGCGGAGTTCCTGACGCATAGGAAAGAGGAGCCATCCTCGTCAATCACGGTTGTCGGTCTGCAAGCTTATGCTCCGGCGAAGGCGGAGCTTCCGGGTCATTTCCAGCCTGTGGCAAATCAGCTGGACCATAAGGAGCAGGGGGCTGGCAATATGCTTGCCAATCCGTCCAGCCGCGAGTTGTCGAGCCACCACCTGAGGACTTTGCTCAATGCTTCAAATCTCAAGGGAAAACAGCTGATCGCATTATTGCTGAGCGGCCTGAGCTTCGACGAAGCCGCCTCGCTGCGGCCGGAGCAGATCGACCTGCCGGCGGGGACCATTAGCGTGGGCGGACGATGGCCACGACTCATTCCCATGAGCCACTTGCTCAGATCGCTGTTCCGGCAATCGGCCAATCGGCCTTGCTGGAATCCGGACGATTCGGGGGTACGCATCGATCTCTCTGCTGCCCTGGTTTGCGCGGCGGTGGACTCAGGCTTGCCGGATCCCCAGCAAATTACCGCCGAGGCAGTCCGGCACAGTTATATCGCCTATCTGGTCCGGCAGGGGTTGCGCTTATCCGATCTCGAACAGGTCATCGGCTACCTGGAACCACCCGCGATGCTGAGCTACAGCGCTTATTCGCCACCGCAGCAAGGACGAAAAATCGGTGAAATAGAGCTGGCTCATCCGGCATTGATGGCTGGATAG
PROTEIN sequence
Length: 615
MVGLIYDYSRPAIYRSSATLLTSAMTPVDRQSGDPDIQHVAIQMQLLLGRELAAETLSRLKAADRSLENLTIPDIQNLLQVEPIPETNLVEILAEDTDPKFPPVLINTWIDVYLDARAAEVKELTGNTARILESEVDDLGNKVEAARESLEIFRKTHDISSIEREENEELARLKGLNESLNKASEEEVKARANLDAIKSAISRGKAVVPDDEKGSLLELELRMQDLREKLADLDKKYTRDYINLHPEFKFIPEQIKDMDNAIQRKRQDGKNVVLTDAEVTYAAARQAVREIRAQLDEHKRRASAFTTKFAKHDALRADLESLEQLYREAQDRLMQVKSGQREKYPQVSVISRAYEPRHPVSPDYRHDALVVLGGSLLLALFGVWMAEFLTHRKEEPSSSITVVGLQAYAPAKAELPGHFQPVANQLDHKEQGAGNMLANPSSRELSSHHLRTLLNASNLKGKQLIALLLSGLSFDEAASLRPEQIDLPAGTISVGGRWPRLIPMSHLLRSLFRQSANRPCWNPDDSGVRIDLSAALVCAAVDSGLPDPQQITAEAVRHSYIAYLVRQGLRLSDLEQVIGYLEPPAMLSYSAYSPPQQGRKIGEIELAHPALMAG*