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SCNpilot_cont_1000_p_scaffold_2676

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2676_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF33_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49152.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2676_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309..3641)
DNA (3333bp) protein (1111aa)
Sensory box/GGDEF family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPG2_9PROT rbh
Sensory box/GGDEF family protein {ECO:0000313|EMBL:CCU61335.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_1000_p_scaffold_2676_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4118..4915
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFY3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61334.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2676_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5118..5933)
DNA (816bp) protein (272aa)
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8B9_NITMU rbh
Dioxygenase {ECO:0000313|EMBL:KIO49148.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
extradiol ring-cleavage dioxygenase III subunit B rbh
SCNpilot_cont_1000_p_scaffold_2676_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7057..8901
DNA (1845bp) protein (615aa)
Phage integrase:Chain length determinant protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHU3_9PROT rbh
Phage integrase:Chain length determinant protein {ECO:0000313|EMBL:CCU62072.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Phage integrase rbh
SCNpilot_cont_1000_p_scaffold_2676_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8877..10010)
DNA (1134bp) protein (378aa)
PUTATIVE ZINC PROTEASE PROTEIN n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI28_9PROT rbh
PUTATIVE ZINC PROTEASE PROTEIN {ECO:0000313|EMBL:CCU62073.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
aminopeptidase rbh
SCNpilot_cont_1000_p_scaffold_2676_7
unknown

Not on your lists

10050..10436
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2676_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10248..10913)
DNA (666bp) protein (222aa)
Probableacetyltransferase/hydrolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHN9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49145.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
putativeacetyltransferase/hydrolase
SCNpilot_cont_1000_p_scaffold_2676_9
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11154..11522)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RV54_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFV95658.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2676_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..13250
DNA (1374bp) protein (458aa)
homospermidine synthase (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44] rbh
Homospermidine synthase {ECO:0000313|EMBL:ABB74998.1}; EC=2.5.1.44 {ECO:0000313|EMBL:ABB74998.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Homospermidine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8C3_NITMU rbh
SCNpilot_cont_1000_p_scaffold_2676_11
unknown

Not on your lists

comp(13330..13518)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2676_12
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13945..14277
DNA (333bp) protein (111aa)
Phage transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2DME0_9BACT
Tax=GWA2_Gallionellales_54_124_curated
SCNpilot_cont_1000_p_scaffold_2676_13
unknown

Not on your lists

14430..14609
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2676_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14700..19304
DNA (4605bp) protein (1535aa)
YD repeat protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3HKD8_RHOS4 rbh
YD repeat-containing protein rbh
Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence {ECO:0000313|EMBL:ABA81806.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
SCNpilot_cont_1000_p_scaffold_2676_15
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19356..19874
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PS69_RHOS1
hypothetical protein
Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence {ECO:0000313|EMBL:ABA81807.1}; Flags: Precursor;; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
SCNpilot_cont_1000_p_scaffold_2676_16
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20082..21233
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000379C816
Conjugal transfer protein TraB {ECO:0000313|EMBL:KHS14662.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
putative conjugal transfer protein traB
SCNpilot_cont_1000_p_scaffold_2676_17
unknown

Not on your lists

21256..22230
DNA (975bp) protein (325aa)

This feature has no annotations

Displaying 17 items

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