ggKbase home page
Advanced Search
Search Help

SCNpilot_cont_1000_p_scaffold_2676_14

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 14700..19304

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
YD repeat protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3HKD8_RHOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 999.99
  • Bit_score: 773
  • Evalue 4.80e-220
  • rbh
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 999.99
  • Bit_score: 773
  • Evalue 1.50e-220
  • rbh
Rhodobacter sphaeroides 2.4.1 plasmid E, partial sequence {ECO:0000313|EMBL:ABA81806.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.3
  • Coverage: 999.99
  • Bit_score: 773
  • Evalue 6.70e-220

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4605
ATGAGCGATAACTCGTTTGAAGGTTCGCAGGCGTTTAACCGGATTTCGAACGCCTATGAAGATGTGATTCCGAATTCGGGATCGTTGATCCTCAATATACCCATCGTCGATCTCATCGGTAAGCAGGAAGGTATCGGGTTGACCATTCAGCTATCCTACTCCATGGGGGCTTCCGGCAGTCTCGGGCTGCCTGATAACTGGAGCTTTGGCATTCCTTCCCTGGTGCCGGGAGAGTCGCTCGAAATCAAGGGCATGCGATACATCATCGACCCTGATTGGACAGATTCCACCGGGTACGCGTCCGGACTCAAGTATGAAAACAATCACGGGATCGCGTTTGTAAACAACATCTCGGGCGCGCCGCTGCCGTATGGACAGTACGGCGCTACCTATCAGTTTGCCTACTCGGACACGGACGGTTCAGCCTATTATTTCGATAGTGCGGGAAAACTGCTGATGAATGCGGATCGCCACGGTAACTATATTTACTATTCCTACACGAGCAACAACCTGCTCGACTACATTGTCGACAGCTTTGGACAGCAGACCACATTCGGATACAACCCGAACCAGATCATCGTCACGTGTCCGGATGGCCGGGCCACGACGCTCAATTACTCCAACGCCGGTATCAGCAGCCTGGTCGATTCCCTGGGACACACGACAAATTTCACCAACAGCTTGCAGGGAAACTTCAATGTCGTCAGCGCGATCGCCTACCCTTCAGGCAAAACCACCAATGTCGGTTACACGAGCATCGAATTTCAAGATTCCAATAATGCCGTCTATGCGATACCGGCCATTTCCGATCTGTATTACATGGATCAGGATAATAATACGCTGGCCCATTATCAATATGCTTATGGCACGGATACCGGTGGCAATACCTTTACTGGATTGCAGGGAGGCTACACGCTGTCAAGCAGCGCCGATGGCCTGCTCGATAGCAACAATACCCTCTACCAGTACAACGTCGAAGTACGCAGCCTTGATTCGGCCGGCAACATCCTGTCCCTCGTCAATACGTTTTATAGCTTTGCCCACGTTCCCATCCAGCAGAACACCTACGTCATAGATGCTGCCGGCGTGCAGAGCGGCTACTTGCAGGTGAACTCGACCTACGATATTTCACCCGACCGCCATAACCAGCAACCCAATTACCTGAGCCCGAAACAAACGGAACAGCTGTTTTTTCAGGGATCGTCCCCGAATGGCGTGCCGCAAAGCAAACGAGCGTTTCAATACGATGTTTTTGGAAACACGACATCGAAGCAATCGAGCTCGTACAACCTCTCAACCCAAACTTACGCAACGGATGTCGTCGAGGAGGCCTCGTATTTTACGCAAGCTGGCATGTCGATTTTCACGCTCATCGATACGGTTGCCAAGACGGACGGCATCACGAACCAGGTTATCAAGACTGTCAATACGTTGACCGCCGACTCCAGGGATATCGCATCGTCGACGGTGAGTTTCAGTAACGACGGCGGCTCTACGTGGAATGACTGGAAAGTCCGCAATGTGGCGTTCGATGCATACGGCCGCGAAACTTCGGAAACATTCCGGTGGGTCAAGAAAAATGCGCCCGGAGTGCAGCAGACATCGAGCAGCTATGCCTACGCTTATGACCCCGCAAAATTTACCGTGACAACGACGATCACGGATGCGCTGGGCTTCAACTCCTCGCATGTGGTCAGCACGATGTACGGGAAGAAGGTGGCCGATACATTGCCGTCCGGAGCGACCACGTCATACGCCTACGATCAGCTTGGCCGCATAGTCAGCATGGCCTTGCCGTCGGGTTTGACGACGACCTATGCTTATAAGCTCCTCGGGATAGACGGCGAAAACAGCACCACGACAACCAACCCTCTGGGGTACCTGACCAAATCGATCTGCGATCCGCTGGGACGGGAGATTGCAACCTGCGACAACGGGAATCCGGTTGCTCCGCAGCAGCTGAGAACATTGTCCCGGAAGCAGTACGACGTGCTGGGAAATGTGATTGCAGAGACGGATGTGTTCGGCAATACCACTTCCGGCGTCTATAACTCGCTAGGCAAACCGACGCGGTCCGTCGATCCGCTGAAGAACCAGACCGACATTGCCTACGATTTTTCTGCCAACACCACTATCACCCGTATCAATGGCATTGCGCAGAAGAAGGTCGTGAATGACAACTGCGGCAGGGCTATCCTGGAAGAAAAATATCCCAATACCAGCAACACAGATCCGGCGTCCCAATATACGCTCAGGCGGGTTTCCACATACGGCGGTTTTGGCAACCTGCTATCGAAAAGCATCAGCCGTGTCGACGGGGCCGCCGCAACCGAACTCTATACCAATGCATATCGATATGACGCCGAATCCCAACAGATCAGCGATCAGTTCAACGCACCGGATGGCTCCCAGAGCCTGACGCAAACCGTCTACGATTTGAACAACAAGGAGATAAGCCATACCAGGAAAGTGGCTTACCCGGACAAGAGGACCTATACCGTGCCAAGCGATGTTTGCCAATACGACGCGCTGGGCCAGATGGTCGAGCTATCCAATAATCTGGATCAGATCGAAGCATATGCCTATAACGGCGACGGTCTTCTCGCAAGCAAAACGCTCTTCGACGGGAGCATCATCAGCTATCAGTACACGGTCGATGGGCAAAAATCCAAGGAATCCTGGACGGAAAACGGCGCAGCGTGCTCCATTGCCTATGCCTACGACGATGGCGGGCGGCTCGTTTCCACGACCGATAAGAATGGCGCCGTGACCAACAGCTACTCCCTGGACAGCGTGCTGACCGGTATCGCCTACCCCGATGGCAAGAAGATTGCCTATACCCTCGACCAATATAGCCGGAAAGTCAGCCAGCTGGATGTCTCGGGCGCCACGACGACCTATGCCTACACCGCGCTGAACCAGCTTTCCAGCGTGAAGAATACCCGGGATTCGTTGACTTACGGTTTCTACGATGACACGAGCAAGAATACGGTGCTGGGTGCACCAAAAAGCGTATCCCTCTCGAACAACTATACCGAAACCTATCGGTACGATGCCCATGACCGAAAAAACGGGACGCAAAAACTGTCGGTGGCAGGCGCCGTCATACTCGATGAAAGCGATGTCTTTGATGCGCTCAACCAGCTGAGCGCCAGCACGCTGAGCTCCACGTTGACCAGCGACGTCAGCCTTAACCAGCAACGTATCTATTCCTATGATGCATTCAGCCAGCTCTCGACCGACATCATCAGGAATAGCTCCGGCACTGTGGTCAGCGACGATGCTTTCCAATACGACGGAAATGCGAATGTCCTGAAAAAAACATCGAATGGCGTGGTGACCAGCTACACGTACAACAGCATCGATCAGCTCACTGCCTACACGGTCGGCACGGGCAGGCAGCAGACACAGACTTACGACAAGAATGGCCGGTTGACCGTCGATGGCGATGGGAACCGCTATGCCTATGATGTCCGGGGCAAACTGTTGAGCGCGGAAGGTGCGGGCGAAATCCAGTACACCTACTACCCCAACGAACTGCTGGCAACCCGGGCGAACCCGGACTCGAACGTCCGGATGTATTACGACAGCGTCCTGCAGGTGGCGAATACCAGTCAAAACGGCGTGCCGACGCAGTTCCTGGCGGTGGGATCGAAACGGTACGCGTCTTATAGCGGCAACGCAGCTCCCTACTATTACGGCACCAATCAGCGCCAGGATACGGTGCTGGGGCTGTCCCCATCTTCCGGCAACGGCGATGCCTTGACCGGCAGTGCCAGCTATCAGGCGTACGGAGCGCAGACGAACGTGCACCTGGGGCTGGATGCCGCCAACAACTTCGCCTGGAATCAGGAATATGCGGATGCAGACAATGGCCTCGTATACCTGCGCGCGCGATATTACGACCCCAAGACCATGCGGTTCATATCCAGAGACAGCAATCGCCTGGACAACCGGTATGCCTATGGCAACGGAGACCCCGTCAACAATATCGACCCCTCCGGCCACGATGCACTGGAATACGCGGCATTTGGCGTCTCCGCCGGCCTTGTGGTCGGCGCGATCGGGGTCGCGGCTTATGTAGCCATAACCTACGGGGCGGCAGTCACCGCGGCAGTGGGCGGGGCGGGAGTAGTGGCATCCGTAGGCGCTGGCGCCCTGGTCGGGGCGGGTGCGCTGGCGCTGGGGGCCGGTGCGGGCACTGTCGGTGCGATAGCCGGAACGGTGACGCTGGCCAGCGCCGCCGTGGCGGCGACCGTAACCGAAGTGTCCATAGGCGCTGCGGTGGGCGCATCCATAGGCGCGGGGTTAGGCGCCTATGTAGGCGCATCGGTGGCAGGAACAGCAGGCATGGCAGCAGGCACGGCTGTAGGTGGCGCAATAGGCGGCTACCTGGGATCGGCTGCGGGTGAAGCCTTGGGATACGCGGGAGCGACCGTGGCAAGCGCGGCGACAGCTGCAACCGAGGCAACATTCGCTGCAGTAACCGCTGCAACGACAGTGGCGACAGACGCAGTGGCGGCAGCGGCGGCCGCGGCAGCTGCCGGAGGGGCGGCAGCAGGCGACGCCGCGCTTTCGTTGCTGGGTCTTCTGTTCCTTGTCTGA
PROTEIN sequence
Length: 1535
MSDNSFEGSQAFNRISNAYEDVIPNSGSLILNIPIVDLIGKQEGIGLTIQLSYSMGASGSLGLPDNWSFGIPSLVPGESLEIKGMRYIIDPDWTDSTGYASGLKYENNHGIAFVNNISGAPLPYGQYGATYQFAYSDTDGSAYYFDSAGKLLMNADRHGNYIYYSYTSNNLLDYIVDSFGQQTTFGYNPNQIIVTCPDGRATTLNYSNAGISSLVDSLGHTTNFTNSLQGNFNVVSAIAYPSGKTTNVGYTSIEFQDSNNAVYAIPAISDLYYMDQDNNTLAHYQYAYGTDTGGNTFTGLQGGYTLSSSADGLLDSNNTLYQYNVEVRSLDSAGNILSLVNTFYSFAHVPIQQNTYVIDAAGVQSGYLQVNSTYDISPDRHNQQPNYLSPKQTEQLFFQGSSPNGVPQSKRAFQYDVFGNTTSKQSSSYNLSTQTYATDVVEEASYFTQAGMSIFTLIDTVAKTDGITNQVIKTVNTLTADSRDIASSTVSFSNDGGSTWNDWKVRNVAFDAYGRETSETFRWVKKNAPGVQQTSSSYAYAYDPAKFTVTTTITDALGFNSSHVVSTMYGKKVADTLPSGATTSYAYDQLGRIVSMALPSGLTTTYAYKLLGIDGENSTTTTNPLGYLTKSICDPLGREIATCDNGNPVAPQQLRTLSRKQYDVLGNVIAETDVFGNTTSGVYNSLGKPTRSVDPLKNQTDIAYDFSANTTITRINGIAQKKVVNDNCGRAILEEKYPNTSNTDPASQYTLRRVSTYGGFGNLLSKSISRVDGAAATELYTNAYRYDAESQQISDQFNAPDGSQSLTQTVYDLNNKEISHTRKVAYPDKRTYTVPSDVCQYDALGQMVELSNNLDQIEAYAYNGDGLLASKTLFDGSIISYQYTVDGQKSKESWTENGAACSIAYAYDDGGRLVSTTDKNGAVTNSYSLDSVLTGIAYPDGKKIAYTLDQYSRKVSQLDVSGATTTYAYTALNQLSSVKNTRDSLTYGFYDDTSKNTVLGAPKSVSLSNNYTETYRYDAHDRKNGTQKLSVAGAVILDESDVFDALNQLSASTLSSTLTSDVSLNQQRIYSYDAFSQLSTDIIRNSSGTVVSDDAFQYDGNANVLKKTSNGVVTSYTYNSIDQLTAYTVGTGRQQTQTYDKNGRLTVDGDGNRYAYDVRGKLLSAEGAGEIQYTYYPNELLATRANPDSNVRMYYDSVLQVANTSQNGVPTQFLAVGSKRYASYSGNAAPYYYGTNQRQDTVLGLSPSSGNGDALTGSASYQAYGAQTNVHLGLDAANNFAWNQEYADADNGLVYLRARYYDPKTMRFISRDSNRLDNRYAYGNGDPVNNIDPSGHDALEYAAFGVSAGLVVGAIGVAAYVAITYGAAVTAAVGGAGVVASVGAGALVGAGALALGAGAGTVGAIAGTVTLASAAVAATVTEVSIGAAVGASIGAGLGAYVGASVAGTAGMAAGTAVGGAIGGYLGSAAGEALGYAGATVASAATAATEATFAAVTAATTVATDAVAAAAAAAAAGGAAAGDAALSLLGLLFLV*