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SCNpilot_cont_1000_p_scaffold_2427_7

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(5516..7495)

Top 3 Functional Annotations

Value Algorithm Source
Arginine decarboxylase Lysine decarboxylase Ornithine decarboxylase {ECO:0000313|EMBL:CCU62303.1}; EC=4.1.1.17 {ECO:0000313|EMBL:CCU62303.1};; EC=4.1.1.18 {ECO:0000313|EMBL:CCU62303.1};; EC=4.1.1.19 {ECO:0000313|EMBL:CCU62303.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 659.0
  • Bit_score: 1242
  • Evalue 0.0
arginine decarboxylase (EC:4.1.1.19); K01583 arginine decarboxylase [EC:4.1.1.19] similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 524.0
  • Bit_score: 985
  • Evalue 8.30e-285
  • rbh
Arginine decarboxylase Lysine decarboxylase Ornithine decarboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIN1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 659.0
  • Bit_score: 1242
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1980
ATGAAAAGACCCATCAGCCGGATTCTCATCATCAATGACGAGAACCTGATACTCAAAGAGCTTATCAAGGGGCTGAATGCTGCCGCGAAGTCTCTGGAAAACCCCCTGGGCATCACTTTTACCGGCGTTACCACGGCGCGCGAAGCGCTGGAAGCGATCAAACAGGACGGAGATATCCAATCGGTCGTGGTGGACGATACGCTGTATACGCTCAAAAACGGCGAAAAAGGTTCTCGCAATCTTCAAATGACGGCATTGAAGCTGGTACAGGAAATTACCCGCTTTCGCCCCGAACTGGACATTTATGTCCTCATTGCGCAGGAAAAGGAGGATGAAGTGGTGGATTCCCTCTTTTCCGAAACGGTAGACGGCTATTTTTACCGTGAAGAGCGGGACTATCGGGGAATGTATCGCATCCTCAATGCGCAGATCCAGGAAAAAGCACGTACGCCGTTCTATGACCAGCTAAAAAGCTATGTTCTCATGGCGAAGGATGCCTGGCACACGCCGGGACACTCCTCCGGCGATTCGTTGCGCGATAGCCCGTGGGCCAGCGATTTTTATCAATTCATCGGGGAGCATATATTCCGGGCGGATCTCTCGGTATCGGTGCCGATGCTGGATTCGTTGATGGAACCGTCCGGCGTGATCGCCGAAGCGCAGAAGATTGCCGCCAAGGCATTTGGGGCGCGACGTACTTTTTTTGCCACCAACGGCACTTCCACCGCCAACAAGGTCATTTTCCAGACGCTGCTCGCTCCCGGGGAAAAACTCCTGCTGGATCGAAACTGTCATAAATCCGTGCATCACGGCGTGGTATTGTCGGGCGCGCATCCGATTTATCTGAACTCCTCGGTCAACAAGAAGTTCAGCGTTTACGGTCCGGTGCCGAAGCAGACCCTGTTCAATGCCATCGAAGAATATCCGGATGCCCAGGCGCTGATACTCACCAGCTGCACCTATGATGGACTGCGATACGATCTGCGCCCCATTATCGAGGCTGCCCATGCAAAAGGCATCAAGGTGATCATCGATGAAGCCTGGTATGGTTTTGCCCGCTTTCATCCCGCATTCCGTCCCACTGCCATGGAAGCGGGAGCGGATTATGCCACCCAGAGCACCCATAAGGTGCTGTCGGCCTTTTCGCAATCCAGCATGATTCATGTCAACGATCCCGATTTCAAGGAACACCTGTTCCGCGAGAATTTCAATATGCATACTTCCACCAGCCCCCAGTACAGCATGATTGCCAGCCTGGATGTGGCGCGCAAGCAGGCGAGCCTGGAAGGTTACAAGCTGCTTTCACGCACGCTCGAGCTGGCAAAGGAGGTGCGGGATCAGGTGAATTCCACCGGGGTGTTCCGGGTGCTGGAACTTGCCGATCTTCTGCCGGAAGAGGTGAAACACGACAATATACAGCTGGATTCCACCAAGGTGACGGTGGACATATCCCATTGCGGCTATACTGTGGAGGACCTGATCCGGGAATTATTCGAGCGGTATAATATTCAGGTGGAGAAATCCACGTTCAATACACTCACTTTGCTGCTTACCATCGGTACCACCCGGAGCAAGGTTTCGCGGCTTTACGACGCGCTGATGCGCATCGCGCGGGAAGGCCGCGCGCCTCGACGCCTCTACCAGATTGCGGAGCTTCCCGGTTTTACGAATTTGAAATACCTGCCGCGCGACGCATTTTATTGTGGCGGAGAGCTGATGCCGCTGCTGGACGAGCAGGAGCGGGTAAATAACGATATCGACGGGAGGGTTTGCGCAGACCAGATTACTCCTTATCCTCCCGGAATCCCGGTGCTGGTGCCAGGGCAGGTGATCACGCAGGAGGTCGTGCAATATCTGGTGAGCATGTTGCGCTCTCAAAAGCGCGTTGAAATGCATGGTATCGTTTATGACGGATATTTGCCTTGCCTCAGGTTGCTCACTCCCCTGGAGGAAAAAGGCTTGAAAAAGCTGAGTAAATAG
PROTEIN sequence
Length: 660
MKRPISRILIINDENLILKELIKGLNAAAKSLENPLGITFTGVTTAREALEAIKQDGDIQSVVVDDTLYTLKNGEKGSRNLQMTALKLVQEITRFRPELDIYVLIAQEKEDEVVDSLFSETVDGYFYREERDYRGMYRILNAQIQEKARTPFYDQLKSYVLMAKDAWHTPGHSSGDSLRDSPWASDFYQFIGEHIFRADLSVSVPMLDSLMEPSGVIAEAQKIAAKAFGARRTFFATNGTSTANKVIFQTLLAPGEKLLLDRNCHKSVHHGVVLSGAHPIYLNSSVNKKFSVYGPVPKQTLFNAIEEYPDAQALILTSCTYDGLRYDLRPIIEAAHAKGIKVIIDEAWYGFARFHPAFRPTAMEAGADYATQSTHKVLSAFSQSSMIHVNDPDFKEHLFRENFNMHTSTSPQYSMIASLDVARKQASLEGYKLLSRTLELAKEVRDQVNSTGVFRVLELADLLPEEVKHDNIQLDSTKVTVDISHCGYTVEDLIRELFERYNIQVEKSTFNTLTLLLTIGTTRSKVSRLYDALMRIAREGRAPRRLYQIAELPGFTNLKYLPRDAFYCGGELMPLLDEQERVNNDIDGRVCADQITPYPPGIPVLVPGQVITQEVVQYLVSMLRSQKRVEMHGIVYDGYLPCLRLLTPLEEKGLKKLSK*