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SCNpilot_cont_1000_p_scaffold_2985_3

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(1734..2993)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 415.0
  • Bit_score: 762
  • Evalue 2.50e-217
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 415.0
  • Bit_score: 742
  • Evalue 6.00e-212
  • rbh
Serine hydroxymethyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH55_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 415.0
  • Bit_score: 762
  • Evalue 1.80e-217
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTTGTCCCCTAAGCTGACATTGGAAAACGTCGACCCGGAATTGTGGCAGGCCATCCGGGGCGAGGTGCAACGCCAGGAAGAATATATCGAGCTGATCGCCTCGGAGAACTATGCCAGCCCTGCGGTCATGCAGGCACAGGGGTCAGTACTTACTAACAAGTATGCGGAGGGTTATCCCGGCAAGCGCTATTACGGCGGCTGCGAGTATGTGGACATCGTGGAGCAGCTCGCGATAGACCGCGTCAAGTCACTGTTCGACGCGGAGTATGTCAATGTCCAGCCTCACTCCGGTTCCCAGGCAAATGCCGCGGTGTATCTTGCAGCGTTGAAACCGGGCGATACGCTCCTCGGCATGTCGCTCGCGCATGGAGGACATTTGACCCACGGCGCATCGGTCAATCTCAGCGGAAAAATTTTCAATTCGGTTGCCTATGGGCTCAAGCCGGAAACCGAGGAACTGGATTATGACGAAGTTGCGCGCCTGGCAAAGGAACACCGGCCGAAAATGATCGTCGCGGGGGCTTCCGCCTACTCGCTGGTGATAGACTGGAAGCGTTTTCGCAAGATCGCCGATGAGGTGGGAGCTTATCTCTTCGTGGACATGGCGCATTATGCCGGCCTCGTGGCGGCGGGATTCTATCCCAATCCGGTGGGCATCGCCGATTTTGTCACCAGTACCACACACAAGACGCTGCGGGGCCCGCGCGGCGGCTTCATCATGGCCAGGCCCGAGCACGAAAAAGTGCTGAACTCGGCGGTTTTCCCGCAAACTCAAGGCGGTCCGCTGATGCATGTGATAGCGGCCAAAGCCGTCGCTTTCAAGGAAGCCGCCAGCGGCGCGTTCAGGGATTACCAGGAGCAGGTCATCGACAATGCCAGGGTAATGGCGAAGGTATTGCAGGAACGCGGATTGCGCATCGTTTCCGGCCGCACGGACTGCCATATGTTTCTGGTGGATCTTCGCCCGAAGAACCTCACGGGCAAGCAGGCGGCGCAATCGCTGGAGTTCGCCCACATCACCGTCAACAAGAACGCCATCCCCAACGACCCGCAAAAGCCTTTCGTCACCAGCGGCATCCGCATAGGCACGCCTGCCATAACCACGCGTGGCTTTACCGAGATCGAAGCGGAACAGCTCGCAAACCTGATCGCCGATGTGCTGGATGCGCCGGAAGACCGCGCCGTGATCCTGGGCGTTGCAGCACAGGCAAAGGCGTTATGCGCAGGATTTCCGGTTTACCAGGAATTTTCCGCTTGA
PROTEIN sequence
Length: 420
MLSPKLTLENVDPELWQAIRGEVQRQEEYIELIASENYASPAVMQAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKSLFDAEYVNVQPHSGSQANAAVYLAALKPGDTLLGMSLAHGGHLTHGASVNLSGKIFNSVAYGLKPETEELDYDEVARLAKEHRPKMIVAGASAYSLVIDWKRFRKIADEVGAYLFVDMAHYAGLVAAGFYPNPVGIADFVTSTTHKTLRGPRGGFIMARPEHEKVLNSAVFPQTQGGPLMHVIAAKAVAFKEAASGAFRDYQEQVIDNARVMAKVLQERGLRIVSGRTDCHMFLVDLRPKNLTGKQAAQSLEFAHITVNKNAIPNDPQKPFVTSGIRIGTPAITTRGFTEIEAEQLANLIADVLDAPEDRAVILGVAAQAKALCAGFPVYQEFSA*