name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_p_scaffold_2985_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1072)
|
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH00_9PROT
rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
|
|
SCNpilot_cont_1000_p_scaffold_2985_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1145..1660)
|
Transcriptional repressor NrdR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFB9_9PROT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Transcriptional repressor nrdR; K07738 transcriptional repressor NrdR
|
|
SCNpilot_cont_1000_p_scaffold_2985_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1734..2993)
|
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
rbh
Serine hydroxymethyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH55_9PROT
rbh
|
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SCNpilot_cont_1000_p_scaffold_2985_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3101..5518)
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA gyrase subunit B n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHG2_9PROT
rbh
|
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SCNpilot_cont_1000_p_scaffold_2985_5
Nitrosospira sp. NIJS18, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5630..6739)
|
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=354583 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NIJS18.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
rbh
DNA polymerase III subunit beta n=1 Tax=Nitrosospira sp. NIJS18 RepID=Q075G4_9PROT
rbh
|
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SCNpilot_cont_1000_p_scaffold_2985_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6938..8305)
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Chromosomal replication initiator protein DnaA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DQT3_9PROT
rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2985_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8492..8626
|
50S ribosomal protein L34 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC1_9PROT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
|
|
SCNpilot_cont_1000_p_scaffold_2985_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9280..10995
|
Membrane protein insertase YidC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHG5_9PROT
rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC
rbh
|
|
SCNpilot_cont_1000_p_scaffold_2985_9
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11281..12480
|
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH07_9PROT
|
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SCNpilot_cont_1000_p_scaffold_2985_10
unknown
|
Not on your lists |
comp(12619..12741)
|
This feature has no annotations |
|
SCNpilot_cont_1000_p_scaffold_2985_11
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12738..13019)
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Transposase for insertion sequence element IS200 n=2 Tax=Pseudomonas aeruginosa group RepID=I7K7G1_PSEPS
Plasmid pAcX50f, complete sequence {ECO:0000313|EMBL:AJE23724.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
transposase-like protein
|