ggKbase home page

SCNpilot_cont_1000_p_scaffold_2985_7

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 8492..8626

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L34 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFC1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 44.0
  • Bit_score: 84
  • Evalue 3.00e-14
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 44.0
  • Bit_score: 84
  • Evalue 4.20e-14
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 44.0
  • Bit_score: 82
  • Evalue 3.60e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 135
ATGAAACGCACTTATCAGCCGTCCGTGACGCGCAGGAAGCGGACGCACGGGTTCCGGGTCCGGATGAAAACCACTGGCGGAGCGCTTGTCATCCGAGCCCGTCGTGCCAAGGGGCGAGCACGCCTGGCGGTATGA
PROTEIN sequence
Length: 45
MKRTYQPSVTRRKRTHGFRVRMKTTGGALVIRARRAKGRARLAV*