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SCNpilot_cont_1000_p_scaffold_2985_9

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 11281..12480

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 399.0
  • Bit_score: 468
  • Evalue 1.20e-128
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 399.0
  • Bit_score: 429
  • Evalue 1.10e-117
tRNA modification GTPase MnmE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH07_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 398.0
  • Bit_score: 454
  • Evalue 1.30e-124

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGTCGGAAGTATGCTCCAGCCGCGTCGTGCCACTTTTTGCAAGTTTCTTGATGAGAACGGCTCGGCGATCGACCAGGGCATCGCGCTCTATTTCCCCTCCCCCCAATCCTACACAGGCGAAGATGTATTGGAATTGCAGGGTCACGGCGGCACAGCGGTAACCGGCCTGGTGCTGTCGAGTTGCCTTCGCGCCGGCGCTCGCCTGGCCCAGCCGGGGGAATTCACGCTACGCGCATTTTTTAACGACAAGATTGATCTGGCGCAAGCGGAAAGCGTGGCTGATATTGTCAATGCCCGGACCGGAGAGGCGGTCCGGTGCGCATTGCGGTCCTTGCAAGGCGAATTTTCCACGGCGATACACGACATGGTGCGCGCGCTGACAGAATTGAGGACCATGGTAGAGGCCGGCCTGGATTTTCCAGAGGAATATGCGGCGGATGCCGAGCATGGGGAGAGTTCTCGCTTTGCTGCCGATGCCCGGATCGAGGAGAGACTGGAGGAGCTTCAGTCGCGGCTTTCCCGGGTGCTCGCCGCGGCCCGTCAGGGAAGCCTTCTGCGGGAAGGCATGAGCATCGTCATCGCCGGGCAGCCTAACGTCGGGAAGTCGAGTTTGCTGAACAGGCTTGCGGGAGAAGAGGTGGCCATCGTCACTGATGTTCCGGGGACGACGCGCGACACCATCAGCCAGAGCATCGAGGTGGAGGGAATACCCTTGCACGTGACGGATACGGCCGGACTGCGGGAGACGGTGGATGCCGTGGAAAGGGAGGGCATTGGGCGGGCGCGTGGGGCCTTGAGCAAGGCGGATCTGGCACTGATGCTGATGGATTGTCGCAGCGGCATGACTGCCGCAGACCGGGCCATACTGGACAGTTTTCCGCGCGAGCTGCCGGTGCTTCATGTATATAACAAGACGGATCTCGCAGCCGGGATGGTGCCCAACGGCGTGGGGGATGCCGACGGGCAGGAAATTTACCTTTCAGCGAGAACTGGCTTGGGTATCGAGCTGTTGCGCCGGAAGCTGGCGGATCTCGCCGGCCGCAAATCCGGCACGGAAGCCGAAGGCATGTTCATGGCGCGCCAGCGGCATTTGCAGGACTTGGCGCGGGGAGGCACGCATATTCAGCAGGCGCTGGGCTTGGTTGGCGATCCTGGCCAGGCGGTTTTTGTCGCGGAAGAGCTACGTCTGGCGCTTTAG
PROTEIN sequence
Length: 400
MVGSMLQPRRATFCKFLDENGSAIDQGIALYFPSPQSYTGEDVLELQGHGGTAVTGLVLSSCLRAGARLAQPGEFTLRAFFNDKIDLAQAESVADIVNARTGEAVRCALRSLQGEFSTAIHDMVRALTELRTMVEAGLDFPEEYAADAEHGESSRFAADARIEERLEELQSRLSRVLAAARQGSLLREGMSIVIAGQPNVGKSSLLNRLAGEEVAIVTDVPGTTRDTISQSIEVEGIPLHVTDTAGLRETVDAVEREGIGRARGALSKADLALMLMDCRSGMTAADRAILDSFPRELPVLHVYNKTDLAAGMVPNGVGDADGQEIYLSARTGLGIELLRRKLADLAGRKSGTEAEGMFMARQRHLQDLARGGTHIQQALGLVGDPGQAVFVAEELRLAL*