ggKbase home page

SCNpilot_cont_1000_p_scaffold_3114_12

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(12431..13516)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular Matrix protein PelE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFZ5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 352.0
  • Bit_score: 407
  • Evalue 1.60e-110
  • rbh
Extracellular Matrix protein PelE {ECO:0000313|EMBL:KIO49165.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 363.0
  • Bit_score: 411
  • Evalue 1.60e-111
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 383.0
  • Bit_score: 387
  • Evalue 4.20e-105
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGCAGCGGCTTCCGTTTTTTTACGCCTTGCCGGCAGGCGCAATGGTGGAAGGCCTGGCCGTGGCGTCGCTCTGGCATGGGGATGGCGGCTTGGGGAGCCTGCTTGCCGCCACTGCGCTGCACGCGCTTTCGTCATATCTTCTGGCGCGAGGCCTGTGGCAGCTGCTGCCCCGAAGATACAGGCTGCCTGCCCCGAGAACCCTTGGATTCCTGTTCGCGATCGTGTGGATACTGCCCGTCATCGGTCCGCTGGGCTTGCTGGTGACCCTAAGCAGTATCCTGACGCATCCTCGCGGCAGTTTTGCTGCAAAAGCAAAAATCATTGCCTTGCCCGAGTTGCCGTTTTCTCCCCCTGTCGTCTTCCCGGTTCCGCCGTACAGCATGGGCGCATTGCGCCAGATCGTGCATTTTGCCCAGAGGCCGTTGAAGCGCCTGAAAGCAGTAATGGCGACACGGCAAATGGCGCCGCGCGAAGCAATGAAAGTATGGTCCAGGGCGACCCGCGATCCGGTCGATGACGTGCGGCTGCTGGCTTTCGCCATGAGGGACAACAGCGAAAAGAAACTGGTGGACCGCATCCAGGCGCTGACGGAGGCGCTGCCCCATGTTCCGCTGCATCGGCGCGGCCACCACAAAGCCATTTCGGCATTATGCTGGGAACTGGTGTATCACCGTCTGGTGCAGGGGGCGGCCCGGCGGCACTGGTTGCAACTTGCCCGGCATCACATCGAGTATGTGCTGGATCCAGCCGCTCCGGAGCCATCCCGCGCGCAGGGTTCAGCGCCGGCTGCTCGCGGCGCCCCGGGGGAGCCGGCGCTGGTCCACGATGCCAACAGCTGGCTGCTATACGGACGGATCCTACTCGATTCGGCCGATGAAGAGCCAGATGACCTGATTCCGGCGAAAAAGGCTTTCGACAACGCACTGGCTTGCGGAGCGGATGCGCAAAAAATCCTGCCATGGCTCGCCGAAATCGCCTTCAGGGAAAGAAAATTTTCAAGGGTGAGACGTTGCCTGCAGGCGTTGAACCGCCCGGGCGAGAAGGGAAGAGACCTGGCACAGGTAAGAGCGTGGTGGATCGCATGA
PROTEIN sequence
Length: 362
MQRLPFFYALPAGAMVEGLAVASLWHGDGGLGSLLAATALHALSSYLLARGLWQLLPRRYRLPAPRTLGFLFAIVWILPVIGPLGLLVTLSSILTHPRGSFAAKAKIIALPELPFSPPVVFPVPPYSMGALRQIVHFAQRPLKRLKAVMATRQMAPREAMKVWSRATRDPVDDVRLLAFAMRDNSEKKLVDRIQALTEALPHVPLHRRGHHKAISALCWELVYHRLVQGAARRHWLQLARHHIEYVLDPAAPEPSRAQGSAPAARGAPGEPALVHDANSWLLYGRILLDSADEEPDDLIPAKKAFDNALACGADAQKILPWLAEIAFRERKFSRVRRCLQALNRPGEKGRDLAQVRAWWIA*