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SCNpilot_cont_1000_p_scaffold_3114

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3114_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153..650
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61343.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3114_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

791..2218
DNA (1428bp) protein (476aa)
Probable peroxidase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFY9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO49155.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
peroxidase rbh
SCNpilot_cont_1000_p_scaffold_3114_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2286..2795
DNA (510bp) protein (170aa)
Conserved uncharacterized protein CreA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPH0_9PROT
CreA {ECO:0000313|EMBL:KIO49156.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CreA; K05805 CreA protein
SCNpilot_cont_1000_p_scaffold_3114_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3029..3487
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF35_9PROT
CHRD domain-containing protein {ECO:0000313|EMBL:KIO49157.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3114_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4913)
DNA (1329bp) protein (443aa)
Putative diheme cytochrome c-553 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ6_9PROT rbh
Putative diheme cytochrome c-553 {ECO:0000313|EMBL:CCU61348.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cytochrome c, class I rbh
SCNpilot_cont_1000_p_scaffold_3114_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4910..5632)
DNA (723bp) protein (241aa)
Putative diheme cytochrome c-553 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ6_9PROT
Putative diheme cytochrome c-553 {ECO:0000313|EMBL:CCU61348.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cytochrome c rbh
SCNpilot_cont_1000_p_scaffold_3114_7
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5810..7201
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8A2_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75019.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3114_8
unknown

Not on your lists

comp(7761..8306)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3114_9
unknown

Not on your lists

8345..9271
DNA (927bp) protein (309aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3114_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9376..10746)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y893_NITMU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABB75028.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3114_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10746..12434)
DNA (1689bp) protein (563aa)
Extracellular matrix protein PelF,glycosyltransferase, group 1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGJ9_9PROT rbh
Extracellular matrix protein PelF,glycosyltransferase, group 1 {ECO:0000313|EMBL:CCU61353.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
group 1 glycosyl transferase rbh
SCNpilot_cont_1000_p_scaffold_3114_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13516)
DNA (1086bp) protein (362aa)
Extracellular Matrix protein PelE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFZ5_9PROT rbh
Extracellular Matrix protein PelE {ECO:0000313|EMBL:KIO49165.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3114_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13516..14799)
DNA (1284bp) protein (428aa)
Extracellular Matrix protein PelD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPH8_9PROT rbh
Extracellular Matrix protein PelD {ECO:0000313|EMBL:KIO49166.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3114_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14796..17489)
DNA (2694bp) protein (898aa)
Extracellular Matrix protein PelB n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF37_9PROT rbh
Pectate lyase {ECO:0000313|EMBL:KIO49228.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3114_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17527..20133)
DNA (2607bp) protein (869aa)
Extracellular Matrix protein PelA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG80_9PROT rbh
Extracellular Matrix protein PelA {ECO:0000313|EMBL:CCU61357.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3114_16
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20611..21588)
DNA (978bp) protein (326aa)
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGK3_9PROT rbh
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress {ECO:0000313|EMBL:CCU61358.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
glycine cleavage T protein (aminomethyl transferase); K06980 rbh
SCNpilot_cont_1000_p_scaffold_3114_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21795..22379
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPI2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61360.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3114_18
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22757..23653)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD32_9PROT rbh
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADZ27994.1}; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_1000_p_scaffold_3114_19
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24238..24831)
DNA (594bp) protein (198aa)
Cytochrome P460 n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD31_9PROT
cytochrome P460
Cytochrome P460 {ECO:0000313|EMBL:ADZ27993.1}; Flags: Precursor;; TaxID=153948 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
SCNpilot_cont_1000_p_scaffold_3114_20
unknown

Not on your lists

25082..25318
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3114_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25347..26342
DNA (996bp) protein (332aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBR3_NITMU rbh
aromatic hydrocarbon degradation protein; K06076 long-chain fatty acid transport protein rbh
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:ABB73808.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_p_scaffold_3114_22
unknown

Not on your lists

26358..26570
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3114_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26727..26915
DNA (189bp) protein (63aa)
Major membrane protein I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSK7_9PROT
Membrane protein {ECO:0000313|EMBL:KIO49174.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
major membrane protein I
SCNpilot_cont_1000_p_scaffold_3114_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26933..27382
DNA (450bp) protein (150aa)
Major membrane protein I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSK7_9PROT
Membrane protein {ECO:0000313|EMBL:KIO49174.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
major membrane protein i
Displaying 24 items

View Taxonomy