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SCNpilot_cont_1000_p_scaffold_18539_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: 4691..5485

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:KIO47891.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 257.0
  • Bit_score: 428
  • Evalue 9.20e-117
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 260.0
  • Bit_score: 407
  • Evalue 2.90e-111
  • rbh
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X1_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 260.0
  • Bit_score: 407
  • Evalue 9.10e-111
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GTGCCGGCAGTGTCCGCTCACCCTTCCGTTCCTCCCGCATCCGGCGCCGGCCCGGCCACGCATAAGCTCCAGAAGTTGCTGGCCCAGGCGGGCCTGGGATCGCGCCGCGAAATGGAAGAGCTGATTGCCGCAGGGCAGGCCACCATCAATGGAAAAATTGCCAAAATCGGGGACCGCGTCGGTCCCGAAGATGTGGTACGGCTGGGAAAACGGGTCATCCACTTCCGGCGCAGGGGCACTTTGCCTCGCGTGATGATCTATCACAAGCCGGAAGGCGAAATCGTCAGCCGCGACGATCCCCAGGGCCGCCCATCCGTCTTCGACAGGCTGCCGCAACTGCGGTCATCGAAGTGGATCGCCATCGGCAGACTGGACTACAATACCAGCGGCTTGCTGATCTTCACCACAAACGGCGAACTGGCCAACCGGCTGATGCACCCCCGCTTCGAGGTCGAGCGCGAATACGCGGTGCGCATCATAGGCCGCCTCACGCCGGAAGCCGTGGAAAGATTGACCGCCGGTATCGAGCTGGAGGACGGGCTGGCCAGGTTCGATCAATTGTCGGACCAGGGTGGCGAGGGTTCCAATCATTGGTACCGGGTGGTGTTGAAGGAAGGCCGCAATCGCGAGGTGCGCCGCATGTTCGAAAGTGTCGGGATGGCGGTCAGCCGGCTGATGCGGGTGCGGTTCGGCCCCATCAACCTGCCCCCGCGCCTGAAGCGCGGCAAATGGATGGAACTGGATGAGGTTGAAGCAAGGCGCCTGCTGGCGCTGGTGGAGGGCAATCAGGGCTGA
PROTEIN sequence
Length: 265
VPAVSAHPSVPPASGAGPATHKLQKLLAQAGLGSRREMEELIAAGQATINGKIAKIGDRVGPEDVVRLGKRVIHFRRRGTLPRVMIYHKPEGEIVSRDDPQGRPSVFDRLPQLRSSKWIAIGRLDYNTSGLLIFTTNGELANRLMHPRFEVEREYAVRIIGRLTPEAVERLTAGIELEDGLARFDQLSDQGGEGSNHWYRVVLKEGRNREVRRMFESVGMAVSRLMRVRFGPINLPPRLKRGKWMELDEVEARRLLALVEGNQG*