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SCNpilot_cont_1000_p_scaffold_18539

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_18539_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..348
DNA (348bp) protein (116aa)
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS33_9PROT
Glycosyl transferase {ECO:0000313|EMBL:KIO48891.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
glycosyl transferase family protein
SCNpilot_cont_1000_p_scaffold_18539_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(375..797)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO47842.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_p_scaffold_18539_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1003..3078
DNA (2076bp) protein (692aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
DNA polymerase III, tau subunit {ECO:0000313|EMBL:ABB75153.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABB75153.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
DNA polymerase III, tau subunit n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7W8_NITMU rbh
SCNpilot_cont_1000_p_scaffold_18539_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3092..3418
DNA (327bp) protein (109aa)
Nucleoid-associated protein EBAPG3_16000 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIV1_9PROT
Nucleoid-associated protein SQ11_14950 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09747 hypothetical protein
SCNpilot_cont_1000_p_scaffold_18539_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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3878..4246
DNA (369bp) protein (123aa)
Recombination protein RecR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ89_9PROT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
recR; recombination protein RecR; K06187 recombination protein RecR
SCNpilot_cont_1000_p_scaffold_18539_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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4691..5485
DNA (795bp) protein (265aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:KIO47891.1}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7X1_NITMU rbh
SCNpilot_cont_1000_p_scaffold_18539_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5504..6400)
DNA (897bp) protein (299aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.72); K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] rbh
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DT44_9PROT rbh
Displaying 7 items

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