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SCNpilot_cont_1000_p_scaffold_60530_1

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(3..383)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKV1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 127.0
  • Bit_score: 246
  • Evalue 1.70e-62
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 127.0
  • Bit_score: 246
  • Evalue 2.40e-62
single-strand binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 127.0
  • Bit_score: 238
  • Evalue 1.40e-60

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCATCAGTCAACAAGGTCATACTCATCGGCAATCTCGGCAAGGATCCCGAAACCCGTTACATGCAGAATGGTGACGCGGTGACCAATATTACCCTGGCTACCACGGAAACCTGGAAAGACAAGAATGGCGAGAAACAGGAAAAAACCGAGTGGCACCGCGTCACGTTTTATCGCAAGCTCGCCGAAATCGCCGGGGAATACCTGAAAAAGGGCCGGCCGGTATATGTCGAGGGGCGTCTGGAAACGCGCAAATGGACCGATAAATCTGGCGCCGAGCGCTACACCACGGAGATTATTGCCAGCGACATGAAAATGCTGGGCAGCAAGCCCGGCAGCGCCAGTTTCGACTCGGGAGAGCGGGAGGAGGGCAGCTATGCG
PROTEIN sequence
Length: 127
MASVNKVILIGNLGKDPETRYMQNGDAVTNITLATTETWKDKNGEKQEKTEWHRVTFYRKLAEIAGEYLKKGRPVYVEGRLETRKWTDKSGAERYTTEIIASDMKMLGSKPGSASFDSGEREEGSYA