ggKbase home page

SCNpilot_cont_1000_p_scaffold_60530_2

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 45 / 55 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(384..1133)

Top 3 Functional Annotations

Value Algorithm Source
Putative transport protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLK2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 249.0
  • Bit_score: 425
  • Evalue 5.20e-116
  • rbh
Membrane protein {ECO:0000313|EMBL:KIO50041.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 249.0
  • Bit_score: 428
  • Evalue 5.10e-117
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 249.0
  • Bit_score: 411
  • Evalue 2.50e-112
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGTTGCATAATCCGCAACTGCTGCGCCTGGATTTTGGCGTATTCGCGCTCCACGCCGTGCTCATGGCGCTGTGGCTGGTCGTGCCGCTGTCATTGCGCAACGCCGGGCTTGCGGCCGATTCGCACTGGAAGATCTATTTCCCCGTGCTGCTTCTTTCCCTGGCATTGATCGTCCCCGCGATCATCTATGCCGAAAAGAAAGCCAAGCTCAAGCCCGTCTTTGTGACCTCCATTGCCGTGCTGCTGGCGAGCCAGATATTTCTCGCCATCACGTCCGATTCCCTTTGGGGCACAGCGGGCGCGCTGCTGGTATTCTTTGCCGCTTTCAACCTGCTGGAAGCCACATTGCCGTCGCTCATTTCCAAGATTGCCCCGGTCGGCGCCAAAGGAACGGCTATCGGGGTATATAGCAGCGTTCAGTTCCTGGGCACTTTCATCGGCGCGACTGCGGGGGGGTATTTGTTCGAGCATCATGGCGGCTTTGCGCTGTTCACATTTTGCGGCGCCCTGTTGGCGCTATGGCTGATGTTCGCCTTTACCATGAAAGCCCCCGCGGCGGTGCGCACCCGGATGTACCATGTCAAGGAGATGGATATCGGGAAAGCCAACGGGCTGTCCAGCCAGCTGGCGGCGCTGCCCGGCGTGCACGAGGCGCTGGTGCTGGCGAGCGAAGGGGTTGCCTATCTGAAGGTGGACATGACGGGTTTCGATGAAAAAGGGGTTGTTCAATTACTCGGGGGAGAAGCGTAA
PROTEIN sequence
Length: 250
VLHNPQLLRLDFGVFALHAVLMALWLVVPLSLRNAGLAADSHWKIYFPVLLLSLALIVPAIIYAEKKAKLKPVFVTSIAVLLASQIFLAITSDSLWGTAGALLVFFAAFNLLEATLPSLISKIAPVGAKGTAIGVYSSVQFLGTFIGATAGGYLFEHHGGFALFTFCGALLALWLMFAFTMKAPAAVRTRMYHVKEMDIGKANGLSSQLAALPGVHEALVLASEGVAYLKVDMTGFDEKGVVQLLGGEA*