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SCNpilot_cont_1000_p_scaffold_4098

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4098_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1716)
DNA (1716bp) protein (572aa)
hypothetical protein; K06445 acyl-CoA dehydrogenase [EC:1.3.99.-]
acyl-CoA dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E0C36F
FadE protein {ECO:0000313|EMBL:KIP80223.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_1000_p_scaffold_4098_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1713..2603)
DNA (891bp) protein (297aa)
Hydrolase, alpha/beta hydrolase fold family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9J4_9GAMM rbh
Peroxidase {ECO:0000313|EMBL:AHY58059.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alpha/beta hydrolase fold domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_4098_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2786..3388
DNA (603bp) protein (201aa)
Regulatory protein TetR n=5 Tax=Stenotrophomonas maltophilia RepID=G0JZL8_STEMA rbh
TetR family transcriptional regulator rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EMI49015.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
SCNpilot_cont_1000_p_scaffold_4098_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3523..6351)
DNA (2829bp) protein (943aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304EA10 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_109, whole genome shotgun sequence {ECO:0000313|EMBL:KIP80220.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_p_scaffold_4098_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6596..7459)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003193F6F rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC44540.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_4098_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7579..8472)
DNA (894bp) protein (298aa)
heat shock protein Hsp33 n=1 Tax=Pseudomonas geniculata RepID=UPI00029A16E9 rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hslO; 33 kDa chaperonin (Heat shock protein 33) (HSP33); K04083 molecular chaperone Hsp33 rbh
SCNpilot_cont_1000_p_scaffold_4098_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8487..9278
DNA (792bp) protein (264aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] rbh
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K033_STEMA rbh
SCNpilot_cont_1000_p_scaffold_4098_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9865..10341
DNA (477bp) protein (159aa)
Cell wall biogenesis glycosyltransferase n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FAX7_9XANT
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHY58065.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
gtrB; bactoprenol glucosyltransferase
SCNpilot_cont_1000_p_scaffold_4098_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10301..10732
DNA (432bp) protein (144aa)
Putative signal transduction protein with CBS domains n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZL2_STEMA
signal transduction protein with CBS domains
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:ACF52755.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_1000_p_scaffold_4098_10
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10749..12659)
DNA (1911bp) protein (637aa)
AsmA family membrane protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9K2_9GAMM rbh
AsmA family membrane protein {ECO:0000313|EMBL:EED40797.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
AsmA family protein; K07290 hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_4098_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12822..13511)
DNA (690bp) protein (230aa)
hemolysin D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037FF583 rbh
Transmembrane hemolysin protein {ECO:0000313|EMBL:BAO21250.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hemolysin III family channel protein; K11068 hemolysin III rbh
SCNpilot_cont_1000_p_scaffold_4098_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13589..15154)
DNA (1566bp) protein (522aa)
Peptide chain release factor 3 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KV94_STEMA rbh
peptide chain release factor 3; K02837 peptide chain release factor 3 rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Displaying 12 items

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