ggKbase home page

SCNpilot_cont_1000_p_scaffold_4722

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4722_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..677)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D67A23
Uncharacterized protein {ECO:0000313|EMBL:AHY60545.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4722_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(674..1423)
DNA (750bp) protein (250aa)
Putative hydrolase of the HAD superfamily n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T477_XANCT rbh
Putative hydrolase of the HAD superfamily {ECO:0000313|EMBL:CCP41933.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily rbh
SCNpilot_cont_1000_p_scaffold_4722_3
Necator americanus, Necator, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(1509..1847)
DNA (339bp) protein (113aa)
calcium-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306984D
EF hand {ECO:0000313|EMBL:ETN72382.1}; TaxID=51031 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;" source="Necator americanus (Human hookworm).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4722_4
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2071..2451)
DNA (381bp) protein (127aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGL1_XANCT
Putative transmembrane protein {ECO:0000313|EMBL:ELQ17220.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4722_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2578..3282)
DNA (705bp) protein (235aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
vanX; hypothetical protein; K08641 D-alanyl-D-alanine dipeptidase [EC:3.4.13.22] rbh
D-alanyl-D-alanine dipeptidase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A347 rbh
SCNpilot_cont_1000_p_scaffold_4722_6
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(3304..5343)
DNA (2040bp) protein (680aa)
sugar phosphate isomerase id=24398892 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein
Tax=RBG_13_Aminicenantes_62_12_curated
SCNpilot_cont_1000_p_scaffold_4722_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5402..6160)
DNA (759bp) protein (253aa)
ampD; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGP6_XANCT rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ELQ17255.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
SCNpilot_cont_1000_p_scaffold_4722_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..8730)
DNA (2427bp) protein (809aa)
Putative TonB dependent receptor n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWS2_PSEUP
TonB-dependent receptor {ECO:0000313|EMBL:KGM54884.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
putative TonB dependent receptor; K02014 iron complex outermembrane recepter protein
Displaying 8 items

View Taxonomy