ggKbase home page

SCNpilot_cont_1000_p_scaffold_3041

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3041_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109..513
DNA (405bp) protein (135aa)
Thioesterase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJW1_STEMA
Thioesterase {ECO:0000313|EMBL:EQM79146.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
thioesterase superfamily protein
SCNpilot_cont_1000_p_scaffold_3041_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..1404
DNA (876bp) protein (292aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
NAD-dependent deacetylase (suirtin) transcription regulator protein (EC:3.5.1.-) rbh
NAD-dependent deacetylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003196B3B rbh
SCNpilot_cont_1000_p_scaffold_3041_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1480..2574
DNA (1095bp) protein (365aa)
FMN oxidoreductase {ECO:0000313|EMBL:CCP39816.1}; EC=1.6.99.1 {ECO:0000313|EMBL:CCP39816.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
FMN oxidoreductase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYC2_XANCT rbh
NADH flavin oxidoreductase rbh
SCNpilot_cont_1000_p_scaffold_3041_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2700..3551
DNA (852bp) protein (284aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
formyltetrahydrofolate deformylase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003648202 rbh
SCNpilot_cont_1000_p_scaffold_3041_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4184)
DNA (624bp) protein (208aa)
Nicotinamidase/pyrazinamidase {ECO:0000313|EMBL:CCP14262.1}; EC=3.5.1.19 {ECO:0000313|EMBL:CCP14262.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
nicotinamidase (EC:3.5.1.19); K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] rbh
Nicotinamidase/pyrazinamidase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CSG3_STEMA rbh
SCNpilot_cont_1000_p_scaffold_3041_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4322..5014
DNA (693bp) protein (231aa)
MgtC/SapB transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS21_9GAMM
MgtC/SapB transporter {ECO:0000313|EMBL:EIL90012.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MgtC family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_cont_1000_p_scaffold_3041_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5277..6701
DNA (1425bp) protein (475aa)
Curli production assembly/transport component CsgG n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPW6_PSEUU rbh
Curli production assembly/transport component CsgG rbh
Curli production assembly/transport component CsgG {ECO:0000313|EMBL:ADV26144.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_cont_1000_p_scaffold_3041_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6925..7215
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B79AF
Uncharacterized protein {ECO:0000313|EMBL:KGM53262.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3041_9
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7276..7839)
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CBQ6_XANCA
acetyltransferase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_1000_p_scaffold_3041_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7841..8380)
DNA (540bp) protein (180aa)
Microcystin-dependent protein id=2658819 bin=GWF1_Xanthomonadales_69_6 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin-dependent protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_cont_1000_p_scaffold_3041_11
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8465..9001)
DNA (537bp) protein (179aa)
Microcystin dependent protein id=2658822 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas oryzae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin-dependent protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_1000_p_scaffold_3041_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9080..9625)
DNA (546bp) protein (182aa)
Microcystin dependent protein id=2658824 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas campestris genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
microcystin dependent protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_1000_p_scaffold_3041_13
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9942..16346
DNA (6405bp) protein (2135aa)
Hemagglutinin-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W099_9SPHN rbh
hemagglutinin-like protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_1000_p_scaffold_3041_14
unknown

Not on your lists

comp(16225..17397)
DNA (1173bp) protein (391aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3041_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18139..18780)
DNA (642bp) protein (214aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotropho
metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E96A52
Displaying 15 items

View Taxonomy