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SCNpilot_cont_1000_p_scaffold_3090

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3090_1
unknown

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3090_2
unknown

Not on your lists

377..568
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3090_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1024..2196)
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
acyl-CoA dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA8416 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGM55881.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCNpilot_cont_1000_p_scaffold_3090_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2442..3821
DNA (1380bp) protein (460aa)
amino acid transporter n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000379DDFA rbh
Amino acid transporter {ECO:0000313|EMBL:AJC48137.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
amino acid transporter; K03293 amino acid transporter, AAT family rbh
SCNpilot_cont_1000_p_scaffold_3090_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3918..4505
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A8J2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO39916.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_6

Not on your lists

4570..4833
DNA (264bp) protein (88aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B7VE80_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02934.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_3090_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4897..6996)
DNA (2100bp) protein (700aa)
dinG; ATP-dependent DNA helicase DinG; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] rbh
ATP-dependent DNA helicase DinG n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7BF99 rbh
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:AHY57231.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_3090_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7070..7423)
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003125F85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53554.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_1000_p_scaffold_3090_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7429..8277)
DNA (849bp) protein (283aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
shikimate 5-dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DBDA25 rbh
SCNpilot_cont_1000_p_scaffold_3090_10
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8279..9031
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AFD0
TolB-like protein {ECO:0000313|EMBL:AJC46755.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9210..9512)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F1C995
Uncharacterized protein {ECO:0000313|EMBL:AHY57225.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_3090_12
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9514..10503)
DNA (990bp) protein (330aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24) rbh
Delta-aminolevulinic acid dehydratase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z749_9XANT rbh
SCNpilot_cont_1000_p_scaffold_3090_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10530..11444)
DNA (915bp) protein (305aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D64C3F rbh
Bestrophin {ECO:0000313|EMBL:AHY57223.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K08994 putative membrane protein rbh
SCNpilot_cont_1000_p_scaffold_3090_14
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11524..11772)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z7Q7_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ETC84453.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11904..12326
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003042A2C
Uncharacterized protein {ECO:0000313|EMBL:AHY57221.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_16
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12429..14219)
DNA (1791bp) protein (597aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E19751 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57220.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3090_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..14746)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B01E
Membrane protein {ECO:0000313|EMBL:AHY57219.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14766..16991)
DNA (2226bp) protein (742aa)
dipeptidyl peptidase IV (EC:3.4.14.5); K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] rbh
peptidase S9 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FE2534 rbh
Peptidase S9 {ECO:0000313|EMBL:AHY57218.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_3090_19
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17078..17686)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AAC2
Wall-associated protein {ECO:0000313|EMBL:KGQ19779.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3090_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19341..20270)
DNA (930bp) protein (310aa)
Wall-associated protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVH8_PSEUP
wall-associated protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Displaying 20 items

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