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SCNpilot_cont_1000_p_scaffold_3424

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3424_1
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..139
DNA (138bp) protein (46aa)
Putative phosphoglycerate mutase {ECO:0000313|EMBL:EKU24014.1}; EC=5.4.2.- {ECO:0000313|EMBL:EKU24014.1};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
phosphoglycerate mutase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F55C04
SCNpilot_cont_1000_p_scaffold_3424_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139..912
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM53315.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
SCNpilot_cont_1000_p_scaffold_3424_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1009..2316
DNA (1308bp) protein (436aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] rbh
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EED38559.1}; EC=6.3.2.12 {ECO:0000313|EMBL:EED38559.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L076_9GAMM rbh
SCNpilot_cont_1000_p_scaffold_3424_4
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2413..3417
DNA (1005bp) protein (335aa)
sporulation protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003814E76 rbh
Sporulation protein {ECO:0000313|EMBL:AJC45698.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3424_5
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3454..4200
DNA (747bp) protein (249aa)
Colicin V production protein n=2 Tax=Xanthomonas RepID=Q8PNM3_XANAC
cvpA; colicin V production protein; K03558 membrane protein required for colicin V production
Colicin V production protein {ECO:0000313|EMBL:AAM35914.1}; TaxID=190486 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citri (strain 306).;"
SCNpilot_cont_1000_p_scaffold_3424_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4232..5698
DNA (1467bp) protein (489aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] rbh
amidophosphoribosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF9BD5 rbh
SCNpilot_cont_1000_p_scaffold_3424_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5702..6544
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZQ2_STEMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM50153.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_1000_p_scaffold_3424_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6646..7092
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0547
Uncharacterized protein {ECO:0000313|EMBL:KHS44123.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
SCNpilot_cont_1000_p_scaffold_3424_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7228..7989)
DNA (762bp) protein (254aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_1000_p_scaffold_3424_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..8803)
DNA (744bp) protein (248aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] rbh
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DE643A rbh
SCNpilot_cont_1000_p_scaffold_3424_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8904..9443)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KK37_STEMA rbh
Phosphoesterase {ECO:0000313|EMBL:KDE92183.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_3424_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9424..10560)
DNA (1137bp) protein (379aa)
Group 1 glycosyl transferase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TPS1_STEMA rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EZP43753.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
group 1 glycosyl transferase rbh
SCNpilot_cont_1000_p_scaffold_3424_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10680..12002)
DNA (1323bp) protein (441aa)
ppx; Exopolyphosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Exopolyphosphatase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KK40_STEMA
Exopolyphosphatase {ECO:0000313|EMBL:EJP77926.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_1000_p_scaffold_3424_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12128..14215)
DNA (2088bp) protein (696aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1] rbh
Polyphosphate kinase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KT91_STEMA rbh
SCNpilot_cont_1000_p_scaffold_3424_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14212..15552)
DNA (1341bp) protein (447aa)
phoR; phosphate regulon sensor protein PhoR (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCH11431.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030AE4A8 rbh
SCNpilot_cont_1000_p_scaffold_3424_16
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15637..16326)
DNA (690bp) protein (230aa)
PhoB family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FFE269 rbh
two-component system regulatory protein; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB rbh
Two-component system regulatory protein {ECO:0000313|EMBL:AAW76920.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
SCNpilot_cont_1000_p_scaffold_3424_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16445..18100)
DNA (1656bp) protein (552aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FA0BBE rbh
Protease rbh
SCNpilot_cont_1000_p_scaffold_3424_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18252..18527
DNA (276bp) protein (92aa)
glutaredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031E3419
glutaredoxin 3; K03676 glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:EJP77931.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_1000_p_scaffold_3424_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18524..18913
DNA (390bp) protein (130aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
alkylhydroperoxidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DD2C64
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3424_20
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19044..20048
DNA (1005bp) protein (335aa)
isocitrate dehydrogenase (NAD(+)) (EC:1.1.1.41); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] rbh
Isocitrate dehydrogenase (NAD(+)) {ECO:0000313|EMBL:ADV27883.1}; EC=1.1.1.41 {ECO:0000313|EMBL:ADV27883.1};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Isocitrate dehydrogenase (NAD(+)) n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUV9_PSEUU rbh
SCNpilot_cont_1000_p_scaffold_3424_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21765..22661
DNA (897bp) protein (299aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
trigger factor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000370280F rbh
trigger factor Tig; K03545 trigger factor rbh
Displaying 21 items

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