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SCNpilot_cont_1000_p_scaffold_3753

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3753_1
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..296)
DNA (294bp) protein (98aa)
Lipase n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=Q2P0J7_XANOM
estA; lipase; esterase; K12686 outer membrane lipase/esterase
Phospholipase/lecithinase/hemolysin {ECO:0000313|EMBL:AJZ41112.1}; TaxID=611301 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri subsp. citri.;"
SCNpilot_cont_1000_p_scaffold_3753_2
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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435..635
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TEB9_9XANT
thiS; thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:AJQ86515.1}; TaxID=129394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzicola.;"
SCNpilot_cont_1000_p_scaffold_3753_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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707..1573
DNA (867bp) protein (289aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
thiazole synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031FB91C rbh
thiG; Thiazole biosynthesis protein ThiG; K03149 thiamine biosynthesis ThiG rbh
SCNpilot_cont_1000_p_scaffold_3753_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1573..2307
DNA (735bp) protein (245aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] rbh
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TYH4_STEMA rbh
SCNpilot_cont_1000_p_scaffold_3753_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2333..4180
DNA (1848bp) protein (616aa)
TrkA-C domain-containing protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TI49_STEMA rbh
TrkA-C domain-containing protein {ECO:0000313|EMBL:EZP47086.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
TrkA-C domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_3753_6
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4214..4555)
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Xanthomonas RepID=Q8PHF2_XANAC
hypothetical protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:CEH73924.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
SCNpilot_cont_1000_p_scaffold_3753_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4726..5007
DNA (282bp) protein (94aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F7A3BD
Stenotrophomonas maltophilia strain ZBG7B contig_66, whole genome shotgun sequence {ECO:0000313|EMBL:KIP82875.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3753_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5198..5905
DNA (708bp) protein (236aa)
fumarylacetoacetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EAF1DD rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:AHY57929.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
fumarylacetoacetate hydrolase rbh
SCNpilot_cont_1000_p_scaffold_3753_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5961..6374
DNA (414bp) protein (138aa)
large conductance mechanosensitive channel protein MscL n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312E2EF
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel
SCNpilot_cont_1000_p_scaffold_3753_10
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6511..7926
DNA (1416bp) protein (472aa)
aminopeptidase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002EAD7CE rbh
Aminopeptidase {ECO:0000313|EMBL:EWC50292.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
aminopeptidase rbh
SCNpilot_cont_1000_p_scaffold_3753_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8080..9750
DNA (1671bp) protein (557aa)
NAD synthetase {ECO:0000313|EMBL:AHY57955.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AHY57955.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
nadE; NAD synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] rbh
NAD synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036DF4D2 rbh
SCNpilot_cont_1000_p_scaffold_3753_12
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9871..10521)
DNA (651bp) protein (217aa)
23S rRNA methyltransferase {ECO:0000313|EMBL:EKU25806.1}; EC=2.1.1.- {ECO:0000313|EMBL:EKU25806.1};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
TrmH family RNA methyltransferase; K03214 RNA methyltransferase, TrmH family [EC:2.1.1.-] rbh
23S rRNA methyltransferase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZJE8_XANCT rbh
Displaying 12 items

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