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SCNpilot_cont_1000_p_scaffold_3881

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3881_1
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..340)
DNA (339bp) protein (113aa)
glycine/betaine ABC transporter permease n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036CD88E
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:AJC47251.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
opuD2; putative glycine betaine transporter 2; K05020 glycine betaine transporter
SCNpilot_cont_1000_p_scaffold_3881_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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790..2667
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas
Phosphomethylpyrimidine synthase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=THIC_STRMK rbh
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC rbh
SCNpilot_cont_1000_p_scaffold_3881_3
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3166..5493
DNA (2328bp) protein (776aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6 rbh
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
cadC; Transcriptional activator cadC rbh
SCNpilot_cont_1000_p_scaffold_3881_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5606..6511
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F20B8A rbh
Transcriptional regulator {ECO:0000313|EMBL:EED38811.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
putative hth transcriptional regulator; K07506 AraC family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_3881_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6558..9398
DNA (2841bp) protein (947aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSI0_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:KDE92087.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_p_scaffold_3881_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9653..10249)
DNA (597bp) protein (199aa)
chemotaxis protein CheY n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFBAEF rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:AHY57810.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative signal transduction protein
Displaying 6 items

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