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SCNpilot_cont_1000_p_scaffold_1085

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1085_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1301
DNA (1299bp) protein (433aa)
Glutathione-regulated potassium-efflux system protein KefB n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D528_STEMA rbh
Stenotrophomonas maltophilia strain ZBG7B contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87387.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative glutathione-regulated cation-efflux system (K(+)/H(+)antiporter); K11747 glutathione-regulated potassium-efflux system protein KefB rbh
SCNpilot_cont_1000_p_scaffold_1085_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1395..4721)
DNA (3327bp) protein (1109aa)
ankyrin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F9AD5F rbh
Ankyrin {ECO:0000313|EMBL:AHY57182.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative transmembrane ankyrin repeat-containing protein; K06867 rbh
SCNpilot_cont_1000_p_scaffold_1085_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4714..4989)
DNA (276bp) protein (92aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E1666F
YcgL domain-containing protein DX03_00450 {ECO:0000256|HAMAP-Rule:MF_01866}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K09902 hypothetical protein
SCNpilot_cont_1000_p_scaffold_1085_4
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..6424
DNA (1224bp) protein (408aa)
3-oxoacyl-[acyl-carrier protein] synthase II {ECO:0000313|EMBL:EKU26801.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EKU26801.1};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
fabF2; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] rbh
3-oxoacyl-ACP synthase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037EAA90 rbh
SCNpilot_cont_1000_p_scaffold_1085_5
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6430..7218
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FSH6_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ95132.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1085_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..7996
DNA (786bp) protein (262aa)
Glycosyl transferase family 2 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWR3_PSEUU rbh
Dolichyl-phosphate mannose synthase {ECO:0000313|EMBL:EYR68064.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
family 2 glycosyl transferase rbh
SCNpilot_cont_1000_p_scaffold_1085_7
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8034..8771)
DNA (738bp) protein (246aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGM54918.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KGM54918.1};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Short chain dehydrogenase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z6Z5_XANCT rbh
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase rbh
SCNpilot_cont_1000_p_scaffold_1085_8
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8889..10016)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00035CA679
Uncharacterized protein {ECO:0000313|EMBL:GAC15570.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola lipolytica E3.;"
protein tyrosine/serine phosphatase
SCNpilot_cont_1000_p_scaffold_1085_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10037..12328)
DNA (2292bp) protein (764aa)
WGS project CALM00000000 data, contig 715 n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7H6_STEMA rbh
WGS project CALM00000000 data, contig 715 {ECO:0000313|EMBL:CCP16725.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
TonB-dependent receptor rbh
SCNpilot_cont_1000_p_scaffold_1085_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12462..13091
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029B2D69
HTH-type transcriptional repressor acnR {ECO:0000313|EMBL:CCP16726.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1085_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..13568)
DNA (450bp) protein (150aa)
phosphotransferase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A92B68
phosphotransferase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_1000_p_scaffold_1085_12
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13555..15894)
DNA (2340bp) protein (780aa)
Hypothetical xanthomonadin exporter protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9F1_XANAP rbh
xanthomonadin exporter protein rbh
Hypothetical xanthomonadin exporter protein {ECO:0000313|EMBL:CBA14681.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
SCNpilot_cont_1000_p_scaffold_1085_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15891..16511)
DNA (621bp) protein (207aa)
fatty acyl CoA synthetase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE48
Fatty acyl CoA synthetase {ECO:0000313|EMBL:KGQ19090.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1085_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16495..17475)
DNA (981bp) protein (327aa)
Acyltransferase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYH1_XANCT rbh
lipid A biosynthesis acyltransferase rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_1000_p_scaffold_1085_15
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17472..17768)
DNA (297bp) protein (99aa)
Dehydratase n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XDT2_9XANT
Dehydratase {ECO:0000313|EMBL:CCF67362.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
putative dehydratase
SCNpilot_cont_1000_p_scaffold_1085_16
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17819..18541)
DNA (723bp) protein (241aa)
ketosynthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000307BFEE
Uncharacterized protein {ECO:0000313|EMBL:KGM51310.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
ketosynthase
SCNpilot_cont_1000_p_scaffold_1085_17
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18547..18816)
DNA (270bp) protein (90aa)
Acyl carrier protein n=3 Tax=Xanthomonas RepID=G2LYK3_9XANT
acyl carrier protein; K02078 acyl carrier protein
Xanthomonadin biosynthesis acyl carrier protein {ECO:0000313|EMBL:CAJ25920.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_1085_18
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19017..20027
DNA (1011bp) protein (337aa)
Pteridine-dependent deoxygenase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7US74_PSEUP rbh
Pteridine-dependent deoxygenase {ECO:0000313|EMBL:KGM54925.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
pteridine-dependent deoxygenase rbh
SCNpilot_cont_1000_p_scaffold_1085_19
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20633..21979)
DNA (1347bp) protein (449aa)
Putative AMP-dependent synthetase and ligase family protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z780_XANCT rbh
AMP-ligase {ECO:0000313|EMBL:AJC46404.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
AMP-ligase rbh
SCNpilot_cont_1000_p_scaffold_1085_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22193..24556
DNA (2364bp) protein (788aa)
Dipeptidyl-peptidase {ECO:0000313|EMBL:CCP18958.1}; EC=3.4.-.- {ECO:0000313|EMBL:CCP18958.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
Dipeptidyl-peptidase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D9A9_STEMA rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_1085_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24668..25084
DNA (417bp) protein (139aa)
DNA mismatch repair protein MutT n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FF2417
Nudix hydrolase family protein PA3470
Nudix hydrolase family protein PA3470 {ECO:0000313|EMBL:CCH14621.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_1000_p_scaffold_1085_22
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25126..25704
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SWY4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39873.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1085_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25727..26671
DNA (945bp) protein (315aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] rbh
coproporphyrinogen III oxidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D9F731 rbh
SCNpilot_cont_1000_p_scaffold_1085_24
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26705..27199)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L7C3_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED39452.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_cont_1000_p_scaffold_1085_25
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27778..29193)
DNA (1416bp) protein (472aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EKU26775.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EKU26775.1};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
polA; DNA polymeraseIprotein (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7]
DNA-directed DNA polymerase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z773_XANCT
SCNpilot_cont_1000_p_scaffold_1085_26
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29211..30461
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F5I3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
SCNpilot_cont_1000_p_scaffold_1085_27
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30562..30849
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=M5TQZ1_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EMI48021.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1085_28
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31030..31479)
DNA (450bp) protein (150aa)
universal stress protein A n=1 Tax=Xanthomonas RepID=UPI0003784B9D
Universal stress protein UspA {ECO:0000313|EMBL:AJC46414.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
putative universal stress protein
SCNpilot_cont_1000_p_scaffold_1085_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31590..33779)
DNA (2190bp) protein (730aa)
uvrD; DNA-dependent helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] rbh
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Putative DNA helicase II n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FND9_STRMK rbh
SCNpilot_cont_1000_p_scaffold_1085_30
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33820..35208)
DNA (1389bp) protein (463aa)
pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AE67 rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJC46425.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein rbh
Displaying items 1-30 of 45 in total

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