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SCNpilot_cont_1000_p_scaffold_1350

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1350_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..740
DNA (738bp) protein (246aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L139_9GAMM rbh
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:EED40505.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit rbh
SCNpilot_cont_1000_p_scaffold_1350_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

822..1757
DNA (936bp) protein (312aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CJC5_STEMA rbh
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CCP09624.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
etfA; putative electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit rbh
SCNpilot_cont_1000_p_scaffold_1350_3
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2078..3115)
DNA (1038bp) protein (346aa)
Family 2 glycosyl transferase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TQJ4_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49399.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
group 2 family glycosyltransferase rbh
SCNpilot_cont_1000_p_scaffold_1350_4
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..4943)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=2 Tax=Pseudomonas amygdali RepID=F3JVF6_PSESZ
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_1000_p_scaffold_1350_5
unknown

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comp(5026..5589)
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1350_6
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5591..6481)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Xanthomonas RepID=Q8PGL9_XANAC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_1000_p_scaffold_1350_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6542..7420)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003658AE9
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADH90717.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_1000_p_scaffold_1350_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7537..8373
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2N4M4_PSEU6
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
SCNpilot_cont_1000_p_scaffold_1350_9
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8363..9724
DNA (1362bp) protein (454aa)
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR37447.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
wzt; polysaccharide ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein rbh
SCNpilot_cont_1000_p_scaffold_1350_10
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9721..14064
DNA (4344bp) protein (1448aa)
glycosyl transferase family 2 n=1 Tax=Pseudomonas amygdali RepID=UPI0002FAF178 rbh
methyltransferase, FkbM family rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_1000_p_scaffold_1350_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14069..15232
DNA (1164bp) protein (388aa)
Glycosyl transferase family 1 n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D7C7_9PSED rbh
group 1 glycosyl transferase
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_cont_1000_p_scaffold_1350_12
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15440..16426)
DNA (987bp) protein (329aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Xanthomonas vasicola RepID=UPI0001CC005C rbh
SCNpilot_cont_1000_p_scaffold_1350_13
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16423..17334)
DNA (912bp) protein (304aa)
rmd; NDP-hexose oxidoreductase (EC:5.1.3.2) rbh
NAD-dependent dehydratase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A781 rbh
NAD-dependent dehydratase {ECO:0000313|EMBL:KGR62302.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicola.;"
SCNpilot_cont_1000_p_scaffold_1350_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17327..18514)
DNA (1188bp) protein (396aa)
CYS1; putative cystathionine beta/gamma-lyase; K01758 cystathionine gamma-lyase [EC:4.4.1.1] rbh
Putative cystathionine beta/gamma-lyase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FLU7_STRMK rbh
Putative cystathionine beta/gamma-lyase {ECO:0000313|EMBL:CAQ44201.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_1000_p_scaffold_1350_15
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18585..19955)
DNA (1371bp) protein (457aa)
cbsB; putative cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] rbh
Cystathionine beta-synthase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DZM5_STEMA rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:EZP45332.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_1000_p_scaffold_1350_16
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20142..20360)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UFN0_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC46016.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCNpilot_cont_1000_p_scaffold_1350_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20754..21641)
DNA (888bp) protein (296aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F18934 rbh
Membrane protein {ECO:0000313|EMBL:AHY60415.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
OmpA/MotB domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_1350_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21641..22027)
DNA (387bp) protein (129aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00002DD088
Outer membran protein {ECO:0000313|EMBL:CCP14571.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
putative outer membrane protein
SCNpilot_cont_1000_p_scaffold_1350_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22121..23254
DNA (1134bp) protein (378aa)
twitching motility protein PilT n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E39A4B rbh
Twitching motility protein PilT {ECO:0000313|EMBL:AHY60417.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
twitching motility protein; K02670 twitching motility protein PilU rbh
SCNpilot_cont_1000_p_scaffold_1350_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23333..23818)
DNA (486bp) protein (162aa)
uptB; maleylacetoacetate isomerase (EC:5.2.1.2); K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
maleylacetoacetate isomerase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036CCE82
Maleylacetoacetate isomerase {ECO:0000313|EMBL:AHY60418.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_1350_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24060..25049)
DNA (990bp) protein (330aa)
fumarylacetoacetate hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003117E5B rbh
fumarylacetoacetate (FAA) hydrolase rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:ACF50186.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_1000_p_scaffold_1350_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25530..26948
DNA (1419bp) protein (473aa)
rhlE1; putative ATP-dependent RNA helicase 1; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
RNA helicase n=1 Tax=Xanthomonas sp. M97 RepID=UPI00039A6EBF rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78124.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_1000_p_scaffold_1350_23
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27006..27362
DNA (357bp) protein (119aa)
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12); K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003765C53
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:GAE55611.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
SCNpilot_cont_1000_p_scaffold_1350_24
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27454..27822
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6784F
Phasin-family protein {ECO:0000313|EMBL:EKU25349.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1350_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28030..28512
DNA (483bp) protein (161aa)
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DAEEEE
Diguanylate cyclase {ECO:0000313|EMBL:AHY60433.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein; K07170 GAF domain-containing protein
SCNpilot_cont_1000_p_scaffold_1350_26
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28509..28883
DNA (375bp) protein (125aa)
Regulatory protein, TfoX family n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7FQG5_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39425.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
TfoX domain-containing protein
SCNpilot_cont_1000_p_scaffold_1350_27
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28901..29662)
DNA (762bp) protein (254aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26); K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
Cobalamin synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC74_9RHIZ
Displaying 27 items

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