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SCNpilot_cont_1000_p_scaffold_1739

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1739_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1457)
DNA (1455bp) protein (485aa)
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] rbh
lytic murein transglycosylase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036C3165 rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EZP46691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
SCNpilot_cont_1000_p_scaffold_1739_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1644..2051
DNA (408bp) protein (136aa)
biopolymer transporter ExbD n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFB466
Biopolymer transporter ExbD {ECO:0000313|EMBL:AHY57706.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
exbD5; biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD
SCNpilot_cont_1000_p_scaffold_1739_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2151..3029
DNA (879bp) protein (293aa)
membrane protein n=2 Tax=Xanthomonadaceae RepID=UPI00036F2F95 rbh
Integral membrane protein {ECO:0000313|EMBL:EED40188.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein; K11939 inner membrane transporter RhtA rbh
SCNpilot_cont_1000_p_scaffold_1739_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3081..3845)
DNA (765bp) protein (255aa)
Putative endonuclease/exonuclease/phosphatase family protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FTY9_STRMK rbh
putative endonuclease/exonuclease/phosphatase family protein; K06896 rbh
Putative endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CAQ47395.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
SCNpilot_cont_1000_p_scaffold_1739_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3889..4704)
DNA (816bp) protein (272aa)
Protein-disulfide isomerase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C8U3_9XANT rbh
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AJC47176.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
dsbA; thiol:disulfide interchange protein; K03673 thiol:disulfide interchange protein DsbA rbh
SCNpilot_cont_1000_p_scaffold_1739_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4824..5468)
DNA (645bp) protein (215aa)
Thiol:disulfide interchange protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3ET12_STEMA rbh
dsbA; putative thiol:disulfide interchange protein; K03673 thiol:disulfide interchange protein DsbA rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
SCNpilot_cont_1000_p_scaffold_1739_7

Not on your lists

comp(5565..6341)
DNA (777bp) protein (259aa)
Cytochrome c n=1 Tax=uncultured organism RepID=T1WCD2_9ZZZZ rbh
Cytochrome c {ECO:0000313|EMBL:AGU12199.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
cytochrome c4 rbh
SCNpilot_cont_1000_p_scaffold_1739_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..7066
DNA (606bp) protein (202aa)
Probable GTP-binding protein EngB n=2 Tax=Stenotrophomonas maltophilia RepID=G0K2Q5_STEMA rbh
GTP-binding protein engB; K03978 GTP-binding protein rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
SCNpilot_cont_1000_p_scaffold_1739_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7238..8200)
DNA (963bp) protein (321aa)
beta-lactamase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2CD80 rbh
Beta-lactamase {ECO:0000313|EMBL:AHY57721.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
methyl parathion hydrolase rbh
SCNpilot_cont_1000_p_scaffold_1739_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..9141)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F276DD rbh
Transcriptional regulator {ECO:0000313|EMBL:AHY57722.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_1739_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9141..9845)
DNA (705bp) protein (235aa)
nodulin 21 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003018E80 rbh
Nodulin 21 {ECO:0000313|EMBL:AHY57723.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1739_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10133..11566
DNA (1434bp) protein (478aa)
glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2] rbh
Glutamate--cysteine ligase {ECO:0000313|EMBL:CCH14101.1}; EC=6.3.2.2 {ECO:0000313|EMBL:CCH14101.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
PREDICTED: glutamate--cysteine ligase, chloroplastic-like, partial n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AAF1 rbh
SCNpilot_cont_1000_p_scaffold_1739_13
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11621..12256
DNA (636bp) protein (212aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003675A3F
Glutathione S-transferase {ECO:0000313|EMBL:KJV41523.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
SCNpilot_cont_1000_p_scaffold_1739_14
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12401..12643
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK12_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM51836.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1739_15
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12758..13033
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:AHY57736.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1739_16
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13170..14279
DNA (1110bp) protein (370aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
adhC; S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] rbh
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3N6_9GAMM rbh
SCNpilot_cont_1000_p_scaffold_1739_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14333..15163
DNA (831bp) protein (277aa)
S-formylglutathione hydrolase (EC:3.1.2.12); K01070 S-formylglutathione hydrolase [EC:3.1.2.12] rbh
S-formylglutathione hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA08CC rbh
Stenotrophomonas maltophilia strain ZBG7B contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86240.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
SCNpilot_cont_1000_p_scaffold_1739_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15260..16696
DNA (1437bp) protein (479aa)
Diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2N8_STEMA rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:AEM52737.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_1000_p_scaffold_1739_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17098..17784)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB5A5E
ATP-binding domain-containing protein {ECO:0000313|EMBL:AKC86979.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein; K06927
SCNpilot_cont_1000_p_scaffold_1739_20
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17785..18123)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4E4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25820.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1739_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18194..19138)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037137E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE91729.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
putative DegV family transcriptional regulator rbh
SCNpilot_cont_1000_p_scaffold_1739_22
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19178..20350)
DNA (1173bp) protein (391aa)
amidohydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F4501D rbh
Amidohydrolase {ECO:0000313|EMBL:AHY57753.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1739_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20347..21756)
DNA (1410bp) protein (470aa)
amidohydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E8FAFA rbh
Stenotrophomonas maltophilia strain ZBG7B contig_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86232.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1739_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21956..22495
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KNL7_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57757.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1739_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22610..23536)
DNA (927bp) protein (309aa)
glutaredoxin n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000315A1AC rbh
Glutaredoxin 3 {ECO:0000313|EMBL:CCP17861.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
glutaredoxin-like protein; K07390 monothiol glutaredoxin rbh
SCNpilot_cont_1000_p_scaffold_1739_26
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23598..24377
DNA (780bp) protein (260aa)
acetylxylan esterase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003721B77 rbh
Acetyl xylan esterase {ECO:0000313|EMBL:AJC47201.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
acetylxylan esterase rbh
SCNpilot_cont_1000_p_scaffold_1739_27
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24418..25674
DNA (1257bp) protein (419aa)
RNA helicase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037855EE rbh
RNA helicase {ECO:0000313|EMBL:AJC46963.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
DEAD/DEAH box helicase
SCNpilot_cont_1000_p_scaffold_1739_28
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25718..26047)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SY30_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP39706.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1739_29
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26125..26796)
DNA (672bp) protein (224aa)
Putative methyltransferase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8YZN7_XANCT
Putative methyltransferase {ECO:0000313|EMBL:EKU24170.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1739_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26820..27470)
DNA (651bp) protein (217aa)
Lysophospholipase L1 and related esterases n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSM8_STEMA
Lysophospholipase L1 and related esterases
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CCH14070.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Displaying items 1-30 of 37 in total

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