ggKbase home page

SCNpilot_cont_1000_p_scaffold_6215

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_6215_1
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1828
DNA (1827bp) protein (609aa)
Putative secreted protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4M1_XANCT
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
SCNpilot_cont_1000_p_scaffold_6215_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2069..3235
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XFA2_DELAC
metallophosphoesterase; K07098
Metallophosphoesterase {ECO:0000313|EMBL:ACM33005.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_cont_1000_p_scaffold_6215_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3249..3752)
DNA (504bp) protein (168aa)
Putative Mg(2+) transporter n=1 Tax=Cellvibrio sp. BR RepID=I3IG89_9GAMM
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_1000_p_scaffold_6215_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3958..4656)
DNA (699bp) protein (233aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
masA; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC:3.1.3.77); K09880 enolase-phosphatase E1 [EC:3.1.3.77] rbh
Enolase-phosphatase E1 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KG21_STEMA rbh
SCNpilot_cont_1000_p_scaffold_6215_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4823..5377)
DNA (555bp) protein (185aa)
mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC:1.13.11.54); K08967 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] rbh
Acireductone dioxygenase n=4 Tax=Stenotrophomonas maltophilia RepID=MTND_STRMK rbh
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malt
SCNpilot_cont_1000_p_scaffold_6215_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..6108)
DNA (657bp) protein (219aa)
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
mtnB; Methylthioribulose-1-phosphate dehydratase (EC:4.2.1.109); K08964 methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] rbh
methylthioribulose-1-phosphate dehydratase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B84FC rbh
SCNpilot_cont_1000_p_scaffold_6215_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6308..6976)
DNA (669bp) protein (223aa)
amino acid permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D8772D
Amino acid permease {ECO:0000313|EMBL:AHY59185.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Amino acid transporters; K03294 basic amino acid/polyamine antiporter, APA family
Displaying 7 items

View Taxonomy