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SCNpilot_cont_1000_p_scaffold_5570

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5570_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(196..780)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFD690
Uncharacterized protein {ECO:0000313|EMBL:AHY58198.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5570_2
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(884..1471)
DNA (588bp) protein (196aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2''''-5'''' RNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B322B6
2'-5' RNA ligase {ECO:0000313|EMBL:KHM93482.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria.;"
SCNpilot_cont_1000_p_scaffold_5570_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1769..2881
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DE046E rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEM52285.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_1000_p_scaffold_5570_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2909..3241)
DNA (333bp) protein (111aa)
hypothetical protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2]
Phosphonoacetate hydrolase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KAJ4_STEMA
Phosphonoacetate hydrolase {ECO:0000313|EMBL:AHY58196.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_5570_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3323..4216)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000300594C rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY58192.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_5570_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4229..4765)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030877F7
Uncharacterized protein {ECO:0000313|EMBL:AHY58191.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5570_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4762..5340)
DNA (579bp) protein (193aa)
RNA polymerase sigma24 factor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FDD69F
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Strain LMCP11 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21209.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
SCNpilot_cont_1000_p_scaffold_5570_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5708..6289
DNA (582bp) protein (194aa)
Small-conductance mechanosensitive channel n=2 Tax=Stenotrophomonas RepID=B8L6N5_9GAMM
Uncharacterized mscS family protein {ECO:0000313|EMBL:CCP12745.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
mechanosensitive ion channel MscS
SCNpilot_cont_1000_p_scaffold_5570_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6429..7640
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=2 Tax=Delftia RepID=A9BYU6_DELAS
major facilitator superfamily protein; K08159 MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX34841.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying 9 items

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