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SCNpilot_cont_1000_p_scaffold_5763

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5763_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..680
DNA (678bp) protein (226aa)
rifampin ADP-ribosyl transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037FCADE
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative chromosome segregation and condensation protein; K05896 segregation and condensation protein A
SCNpilot_cont_1000_p_scaffold_5763_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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697..1545
DNA (849bp) protein (283aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030391CD rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B rbh
SCNpilot_cont_1000_p_scaffold_5763_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1542..2987
DNA (1446bp) protein (482aa)
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
RNA-binding S4 domain protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SPX1_STRM5 rbh
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACF52391.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
SCNpilot_cont_1000_p_scaffold_5763_4
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3189..3620)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L7G790_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ01483.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5763_5
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3727..4524)
DNA (798bp) protein (266aa)
Putative amidohydrolase n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BRS2_9XANT rbh
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:KHL52901.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
carbon-nitrogen hydrolase; K08590 carbon-nitrogen hydrolase family protein rbh
SCNpilot_cont_1000_p_scaffold_5763_6
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4517..4861)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123C5_POLSJ
Uncharacterized protein {ECO:0000313|EMBL:KFL36246.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_5763_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4858..6006)
DNA (1149bp) protein (383aa)
putative aminotransferase; K14287 methionine aminotransferase [EC:2.6.1.-] rbh
Aminotransferase class I and II n=3 Tax=Stenotrophomonas maltophilia RepID=B4SPX8_STRM5 rbh
Aminotransferase {ECO:0000313|EMBL:AHY58459.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
SCNpilot_cont_1000_p_scaffold_5763_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6168..6824
DNA (657bp) protein (219aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
cytochrome c biogenesis protein CcmA; K02193 heme exporter protein A [EC:3.6.3.41] rbh
cytochrome C biogenesis protein CcmA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000375EC59 rbh
SCNpilot_cont_1000_p_scaffold_5763_9
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6821..7516
DNA (696bp) protein (232aa)
Heme exporter protein B n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BDH8_9XANT rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B rbh
SCNpilot_cont_1000_p_scaffold_5763_10
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7767..8222
DNA (456bp) protein (152aa)
Azurin blue-copper protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWJ7_PSEUP
azurin blue-copper protein
Azurin blue-copper protein {ECO:0000313|EMBL:AER56504.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_1000_p_scaffold_5763_11
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..9116
DNA (753bp) protein (251aa)
ABC transporter heme permease n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWJ8_PSEUP rbh
ABC transporter heme permease; K02195 heme exporter protein C rbh
ABC transporter heme permease {ECO:0000313|EMBL:AER56505.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_cont_1000_p_scaffold_5763_12
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9113..9292
DNA (180bp) protein (60aa)
heme exporter protein CcmD n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DF9354
Heme exporter protein CcmD {ECO:0000313|EMBL:KGM57243.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
SCNpilot_cont_1000_p_scaffold_5763_13
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9289..9756
DNA (468bp) protein (156aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SSW5_XANCT
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
ccmE2; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE
SCNpilot_cont_1000_p_scaffold_5763_14
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9757..10119
DNA (363bp) protein (121aa)
Cytochrome c heme lyase subunit CcmF n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQN7_STEMA
C-type cytochrome biogenesis membrane protein {ECO:0000313|EMBL:EZP42411.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ccmF; Cytochrome c heme lyase subunit CcmF; K02198 cytochrome c-type biogenesis protein CcmF
Displaying 14 items

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