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SCNpilot_cont_1000_p_scaffold_2209

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2209_1
unknown

Not on your lists

413..1291
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2209_2
unknown

Not on your lists

1547..2212
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2209_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2520..4016)
DNA (1497bp) protein (499aa)
Putative membrane protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L8E5_9ACTO
Putative membrane protein {ECO:0000313|EMBL:EKX68970.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
putative integral membrane protein
SCNpilot_cont_1000_p_scaffold_2209_4
unknown

Not on your lists

comp(4166..4825)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2209_5
unknown

Not on your lists

comp(4938..5435)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2209_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5747..6985)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003777E85 rbh
Histidine kinase {ECO:0000313|EMBL:KJK42329.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_2209_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6982..7641)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000368F595 rbh
cutR; Transcriptional regulatory protein cutR
Tax=RBG_16_Actinobacteria_64_13_curated
SCNpilot_cont_1000_p_scaffold_2209_8
unknown

Not on your lists

7775..8401
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003667806
SCNpilot_cont_1000_p_scaffold_2209_9
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8394..9500
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003644BF3 rbh
Conserved putative secreted protein {ECO:0000313|EMBL:AIG73472.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
peptidoglycan-binding protein
SCNpilot_cont_1000_p_scaffold_2209_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9497..10183
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000381C0B0
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETK32993.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC-type transporter, ATPase subunit
SCNpilot_cont_1000_p_scaffold_2209_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10183..11397
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000363CC4C rbh
ABC transporter permease {ECO:0000313|EMBL:ETK32270.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC transporter; K02004 putative ABC transport system permease protein
SCNpilot_cont_1000_p_scaffold_2209_12
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11772..14027
DNA (2256bp) protein (752aa)
Helicase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZT3_CELFA
Helicase domain protein {ECO:0000313|EMBL:AEE47249.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
helicase domain-containing protein
SCNpilot_cont_1000_p_scaffold_2209_13
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14033..14725)
DNA (693bp) protein (231aa)
Putative 2-component system response regulator n=1 Tax=Streptomyces griseochromogenes RepID=Q841M5_9ACTO rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN83968.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
response regulator receiver
SCNpilot_cont_1000_p_scaffold_2209_14
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14722..15837)
DNA (1116bp) protein (372aa)
Histidine kinase dimerization and phosphoacceptor region n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TCA2_MICAI
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ62887.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
histidine kinase dimerization and phosphoacceptor region
SCNpilot_cont_1000_p_scaffold_2209_15
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15997..16929
DNA (933bp) protein (311aa)
Putative ABC transporter ATP-binding protein YxlF {ECO:0000313|EMBL:KJF15511.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJF15511.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
ABC transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B5D6D2
ABC transporter; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_2209_16
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

16926..17723
DNA (798bp) protein (266aa)
Tax=RBG_13_Actinobacteria_55_18_curated
SCNpilot_cont_1000_p_scaffold_2209_17

Not on your lists

comp(17745..18653)
DNA (909bp) protein (303aa)
Putative short chain dehydrogenase n=1 Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CGQ9_9ACTO rbh
Putative short chain dehydrogenase rbh
Putative short chain dehydrogenase {ECO:0000313|EMBL:AFD03097.1}; TaxID=1136413 species="Bacteria; environmental samples.;" source="uncultured bacterium 8.;"
SCNpilot_cont_1000_p_scaffold_2209_18
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18733..20598)
DNA (1866bp) protein (622aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSM7_XYLCX rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
Na+/H+ antiporter NhaA rbh
SCNpilot_cont_1000_p_scaffold_2209_19
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20714..21586)
DNA (873bp) protein (291aa)
FAD linked oxidase domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1U9_CELFA rbh
FAD linked oxidase domain-containing protein rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEE47519.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_2209_20
Brevibacterium mcbrellneri, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21627..22346)
DNA (720bp) protein (240aa)
Membrane protein n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YMR8_9MICO rbh
Membrane protein {ECO:0000313|EMBL:EFG47483.1}; TaxID=585530 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium mcbrellneri ATCC 49030.;"
integral membrane protein rbh
SCNpilot_cont_1000_p_scaffold_2209_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22459..23007
DNA (549bp) protein (183aa)
regulatory protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B71D71
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82118.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
MerR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_2209_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23004..23945
DNA (942bp) protein (314aa)
oxidoreductase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58138 rbh
short-chain dehydrogenase/reductase SDR rbh
Oxidoreductase {ECO:0000313|EMBL:ETK37449.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_cont_1000_p_scaffold_2209_23
Brevibacterium linens, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24042..24863
DNA (822bp) protein (274aa)
Estradiol 17-beta-dehydrogenase {ECO:0000313|EMBL:KHS53277.1}; EC=1.1.1.62 {ECO:0000313|EMBL:KHS53277.1};; TaxID=1703 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium linens.;"
short-chain dehydrogenase n=1 Tax=Brevibacterium linens RepID=UPI000050F803 rbh
short-chain dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_2209_24
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24898..26142
DNA (1245bp) protein (415aa)
Amidohydrolase (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YXJ3_9BACI rbh
Amidohydrolase {ECO:0000313|EMBL:ERI40200.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
amidohydrolase rbh
SCNpilot_cont_1000_p_scaffold_2209_25
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26211..27221
DNA (1011bp) protein (337aa)
Aldo/keto reductase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3M4_CELGA rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:AEI11927.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_2209_26
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27485..28159
DNA (675bp) protein (225aa)
Secreted protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFJ1_NOCSJ
secreted protein
Secreted protein {ECO:0000313|EMBL:ABL80576.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_p_scaffold_2209_27
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28244..28750
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNE2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80717.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_2209_28
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28747..29607
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C66E1
oligopeptidase B
Uncharacterized protein {ECO:0000313|EMBL:AGW41602.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
SCNpilot_cont_1000_p_scaffold_2209_29
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29752..30231
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI00036EC6AC
Uncharacterized protein {ECO:0000313|EMBL:CCQ44257.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2209_30
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30606..32474)
DNA (1869bp) protein (623aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SC38_9ACTO
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
Na+/H+ antiporter NhaA
Displaying items 1-30 of 57 in total

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