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SCNpilot_cont_1000_p_scaffold_2293

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2293_1
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18..962)
DNA (945bp) protein (315aa)
MIP family channel protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YNX6_9ACTO rbh
MIP family channel protein {ECO:0000313|EMBL:AIY00626.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
putative transport integral membrane protein rbh
SCNpilot_cont_1000_p_scaffold_2293_2
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1329..1553)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:AIZ65477.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
SCNpilot_cont_1000_p_scaffold_2293_3
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1572..1943)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V237_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGJ79126.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
rhodanese domain-containing protein
SCNpilot_cont_1000_p_scaffold_2293_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2326..3375
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036422C3
Integrase {ECO:0000313|EMBL:EYR61847.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
site-specific recombinase XerD
SCNpilot_cont_1000_p_scaffold_2293_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3395..4051
DNA (657bp) protein (219aa)
Integrase n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2K3_9ACTO
Integrase {ECO:0000313|EMBL:EON25510.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
integrase family protein
SCNpilot_cont_1000_p_scaffold_2293_6
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4180..4437
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036665AE
Uncharacterized protein {ECO:0000313|EMBL:KIF77829.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2293_7
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4497..5120
DNA (624bp) protein (208aa)
XRE family transcriptional regulator n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00035D67C9
XRE family transcriptional regulator {ECO:0000313|EMBL:EWT01554.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
helix-turn-helix domain protein
SCNpilot_cont_1000_p_scaffold_2293_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5113..5823
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003716D8A rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD75591.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
B3/4 domain-containing protein rbh
SCNpilot_cont_1000_p_scaffold_2293_9
actinobacterium acMicro-4, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5872..6195
DNA (324bp) protein (108aa)
antibiotic biosynthesis monooxygenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000371549D
Uncharacterized protein {ECO:0000313|EMBL:KGA06216.1}; TaxID=1504317 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2293_10
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6198..7442
DNA (1245bp) protein (415aa)
cystathionine gamma-synthase; K01761 methionine-gamma-lyase [EC:4.4.1.11] rbh
cystathionine gamma-lyase n=1 Tax=Glaciibacter superstes RepID=UPI0003B58D93 rbh
Cystathionine gamma-lyase {ECO:0000313|EMBL:KGJ73376.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
SCNpilot_cont_1000_p_scaffold_2293_11
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7470..8177
DNA (708bp) protein (236aa)
FMN-binding negative transcriptional regulator n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HRC2_MYCRH rbh
Transcriptional regulator {ECO:0000313|EMBL:KDE98414.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2293_12
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9199..10698)
DNA (1500bp) protein (500aa)
alpha amylase catalytic region; K00690 sucrose phosphorylase [EC:2.4.1.7] rbh
Alpha amylase catalytic region n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3A0_CELFA rbh
Sucrose phosphorylase {ECO:0000313|EMBL:KEP23790.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
SCNpilot_cont_1000_p_scaffold_2293_13
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10892..11899
DNA (1008bp) protein (336aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACU74619.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACU74619.1};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
LacI family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B36304 rbh
SCNpilot_cont_1000_p_scaffold_2293_14
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11896..12930)
DNA (1035bp) protein (345aa)
Aldo/keto reductase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9U5_GEOOG rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:ADB73808.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_p_scaffold_2293_15
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12963..13817)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003633BBD
NAD-dependent dehydratase {ECO:0000313|EMBL:KGM08688.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_cont_1000_p_scaffold_2293_16
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14013..14912)
DNA (900bp) protein (300aa)
sugar ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B33BFD rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:AKH82239.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_p_scaffold_2293_17
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14909..15316)
DNA (408bp) protein (136aa)
ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B659D8
Sugar ABC transporter permease {ECO:0000313|EMBL:AKH82240.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family; K02025 multiple sugar transport system permease protein
Displaying 17 items

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