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SCNpilot_cont_1000_p_scaffold_2552

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2552_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(53..952)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0HHR6_CORVD
Transposase {ECO:0000313|EMBL:KDN16438.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2552_2
unknown

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1449..1628
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2552_3
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1685..2461)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWH9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KIF77279.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
SCNpilot_cont_1000_p_scaffold_2552_4
unknown

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2609..2962
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2552_5
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3014..3388
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037FA4CD
Uncharacterized protein {ECO:0000313|EMBL:EST18159.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2552_6
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3459..4481
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CFD6_MYCTH rbh
Uncharacterized protein {ECO:0000313|EMBL:CQD24749.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2552_7
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4549..5091)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V7M7_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EFL09511.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_cont_1000_p_scaffold_2552_8
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5109..5549)
DNA (441bp) protein (147aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4E9_CELGA
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:AEI12055.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_2552_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5746..6051)
DNA (306bp) protein (102aa)
Putative transposase n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UW84_9MICO
Transposase {ECO:0000313|EMBL:KGH45336.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
transposase IS3/IS911 family protein
SCNpilot_cont_1000_p_scaffold_2552_10
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6023..6721)
DNA (699bp) protein (233aa)
Phage integrase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0Y2_9ACTO
Phage integrase {ECO:0000313|EMBL:EGD41021.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
integrase/recombinase
SCNpilot_cont_1000_p_scaffold_2552_11
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7058..8659)
DNA (1602bp) protein (534aa)
Xylan 1,4-beta-xylosidase (EC:3.2.1.37); K01198 xylan 1,4-beta-xylosidase [EC:3.2.1.37]; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] rbh
xylan 1,4-beta-xylosidase n=1 Tax=Humibacter albus RepID=UPI0003B61AB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM17716.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_1000_p_scaffold_2552_12
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8656..10977)
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4405A rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM17717.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2552_13
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11058..11897)
DNA (840bp) protein (280aa)
sugar ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B48668 rbh
carbohydrate ABC transporter membrane protein 2, CUT1 family; K02026 multiple sugar transport system permease protein rbh
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:ADX74751.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
SCNpilot_cont_1000_p_scaffold_2552_14
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11894..12745)
DNA (852bp) protein (284aa)
ABC transporter permease n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1ZZX9_9MICC rbh
SPG23_c26, whole genome shotgun sequence {ECO:0000313|EMBL:KIS26024.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_1000_p_scaffold_2552_15
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12876..13997)
DNA (1122bp) protein (374aa)
ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B2EE22 rbh
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK05062.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
Displaying 15 items

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