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SCNpilot_cont_1000_p_scaffold_3050

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3050_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..439)
DNA (438bp) protein (146aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1B0_CELFA
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:AEE45081.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_3050_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(449..748)
DNA (300bp) protein (100aa)
NADH-ubiquinone oxidoreductase chain 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJ26_CELFN
SCNpilot_cont_1000_p_scaffold_3050_3
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(745..1671)
DNA (927bp) protein (309aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D93E2E
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:AEE45079.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_3050_4
unknown

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comp(1668..1787)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3050_5
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1787..3133)
DNA (1347bp) protein (449aa)
NADH dehydrogenase I, D subunit (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1A2_CELFA rbh
SCNpilot_cont_1000_p_scaffold_3050_6
unknown

Not on your lists

3482..3601
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3050_7
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3598..4701
DNA (1104bp) protein (368aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U8_CELGA
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_1000_p_scaffold_3050_8
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4817..5113
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U4_CELGA
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:KGM17777.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_1000_p_scaffold_3050_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5113..5733
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI81_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL86922.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative multicopper oxidase
SCNpilot_cont_1000_p_scaffold_3050_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5781..6035
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SKU0_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL82425.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_p_scaffold_3050_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6142..7374
DNA (1233bp) protein (411aa)
Putative Monooxygenase FAD-binding protein id=4020011 bin=GWC2_Methylomirabilis_70_24 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
monooxygenase FAD-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_1000_p_scaffold_3050_12
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7743..8021
DNA (279bp) protein (93aa)
Heavy metal transporter {ECO:0000313|EMBL:KDQ00990.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
SCNpilot_cont_1000_p_scaffold_3050_13
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8280..9929
DNA (1650bp) protein (550aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_3050_14
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9916..11070
DNA (1155bp) protein (385aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_3050_15
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11124..11405
DNA (282bp) protein (94aa)
Regulated in copper repressor n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LNV4_9MICO
Regulated in copper repressor {ECO:0000313|EMBL:ERG63662.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3050_16
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11640..12986
DNA (1347bp) protein (449aa)
Putative Prolipoprotein diacylglyceryl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RQ36_BLASD
Diacylglyceryl transferase {ECO:0000313|EMBL:EYR64507.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
lgt2; putative Prolipoprotein diacylglyceryl transferase
SCNpilot_cont_1000_p_scaffold_3050_17
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13066..13257
DNA (192bp) protein (64aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_3050_18
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13334..15775
DNA (2442bp) protein (814aa)
Copper-translocating P-type ATPase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE59_CELFN
ATPase P {ECO:0000313|EMBL:EYR63755.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
copper-translocating P-type ATPase
SCNpilot_cont_1000_p_scaffold_3050_19
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15809..17509
DNA (1701bp) protein (567aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002EBE735
SCNpilot_cont_1000_p_scaffold_3050_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17506..17949
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNA6_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL83291.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_p_scaffold_3050_21
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18058..18465
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U0_CELGA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10657.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_3050_22
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18489..18761
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M503_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EWT07746.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3050_23
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18758..19045
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum ATCC 14067 RepID=G6WXC8_CORGT
Uncharacterized protein {ECO:0000313|EMBL:AKF28715.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
hypothetical membrane protein
SCNpilot_cont_1000_p_scaffold_3050_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19110..20006
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JX87_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EYR62183.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3050_25
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20008..21318
DNA (1311bp) protein (437aa)
Peptidase M23 n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBQ1_CELFN
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADG74146.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_3050_26
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21340..22116)
DNA (777bp) protein (259aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
arginine ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6EC8E
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM10918.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Displaying 26 items

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