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SCNpilot_cont_1000_p_scaffold_1089

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1089_1
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(434..1186)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003822BF9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU70831.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_p_scaffold_1089_2
Mycobacterium yongonense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1740..2291
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Mycobacterium RepID=S4ZDE8_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP65553.1}; TaxID=1138871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium yongonense 05-1390.;"
SCNpilot_cont_1000_p_scaffold_1089_3
Mycobacterium yongonense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2317..3231
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Mycobacterium RepID=S4ZK14_9MYCO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP65552.1}; TaxID=1138871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium yongonense 05-1390.;"
SCNpilot_cont_1000_p_scaffold_1089_4
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3228..4499
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Dietzia alimentaria RepID=UPI00029A3D7E rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABL90058.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
SCNpilot_cont_1000_p_scaffold_1089_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4664..5638
DNA (975bp) protein (325aa)
Phage integrase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0Y2_9ACTO rbh
Phage integrase {ECO:0000313|EMBL:EGD41021.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
integrase
SCNpilot_cont_1000_p_scaffold_1089_6
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5811..6779
DNA (969bp) protein (323aa)
AAA ATPase central domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVX5_FRASU rbh
ATPase AAA {ECO:0000313|EMBL:KJC64679.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
AAA ATPase rbh
SCNpilot_cont_1000_p_scaffold_1089_7
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6772..9333
DNA (2562bp) protein (854aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVX4_FRASU rbh
Subtilisin family serine protease {ECO:0000313|EMBL:KJC64680.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_1089_8
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9449..9643)
DNA (195bp) protein (65aa)
Integrase core domain protein n=3 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S7Z9_9ACTO
Integrase core domain protein {ECO:0000313|EMBL:EFQ84815.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_cont_1000_p_scaffold_1089_9
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9669..10739)
DNA (1071bp) protein (357aa)
Putative IS110 family ISLxx2-like transposase n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82QY1_STRAW rbh
IS110 family transposase rbh
Putative IS110 family ISLxx2-like transposase {ECO:0000313|EMBL:BAC68073.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
SCNpilot_cont_1000_p_scaffold_1089_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11087..12481)
DNA (1395bp) protein (465aa)
Transcriptional regulator (Fragment) n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JPK2_STRRC rbh
Transcriptional regulator {ECO:0000313|EMBL:EST18764.1}; Flags: Fragment;; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
transposase, IS30 family rbh
SCNpilot_cont_1000_p_scaffold_1089_11
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13121..13414)
DNA (294bp) protein (98aa)
Transposase n=2 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S7Z8_9ACTO
Transposase {ECO:0000313|EMBL:EFQ84814.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
transposase IS3/IS911 family protein
SCNpilot_cont_1000_p_scaffold_1089_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14010..15023)
DNA (1014bp) protein (338aa)
Phosphate regulon sensor protein PhoR {ECO:0000313|EMBL:KJL33415.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL33415.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
histidine kinase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3CE4C
Putative histidine kinase
SCNpilot_cont_1000_p_scaffold_1089_13
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15020..15685)
DNA (666bp) protein (222aa)
response regulator n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034C8B75
Response regulator {ECO:0000313|EMBL:KFF60116.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
Putative transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1089_14
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15689..16363)
DNA (675bp) protein (225aa)
alkaline phosphatase n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B30AE6
Uncharacterized protein {ECO:0000313|EMBL:EPD86586.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein; K03975 membrane-associated protein
SCNpilot_cont_1000_p_scaffold_1089_15
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16360..17010)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI000360C911
Uncharacterized protein {ECO:0000313|EMBL:KIC69030.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
PAP2_like_2 multi-domain protein
SCNpilot_cont_1000_p_scaffold_1089_16
unknown

Not on your lists

18162..18389
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1089_17
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18494..19354
DNA (861bp) protein (287aa)
zinc permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5D1F6 rbh
ZIP Zinc transporter {ECO:0000313|EMBL:KJE21721.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
zinc transporter; K07238 zinc transporter, ZIP family
SCNpilot_cont_1000_p_scaffold_1089_18
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19607..20947)
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBH6_INTC7 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_1089_19
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20944..21651)
DNA (708bp) protein (236aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBH5_INTC7 rbh
transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU49503.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_20
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21724..22041)
DNA (318bp) protein (106aa)
VacJ family lipoprotein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBH4_INTC7
VacJ family lipoprotein
VacJ family lipoprotein {ECO:0000313|EMBL:ADU49502.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_21
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22129..22971)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D442A
TonB family protein {ECO:0000313|EMBL:EWM18752.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1089_22
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23195..24286)
DNA (1092bp) protein (364aa)
Predicted protein n=1 Tax=Streptomyces sp. C RepID=D9VSM4_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL18825.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1089_23
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24527..25468)
DNA (942bp) protein (314aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L2_INTC7 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_1000_p_scaffold_1089_24
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25465..26145)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L1_INTC7 rbh
transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU49173.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_25
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26201..26743)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8L0_INTC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49172.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_26
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26740..27711)
DNA (972bp) protein (324aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K9_INTC7 rbh
multi-copper enzyme maturation ABC transporter permease-like protein; K01992 ABC-2 type transport system permease protein rbh
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein {ECO:0000313|EMBL:ADU49171.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_27
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27704..28642)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K8_INTC7 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADU49170.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_p_scaffold_1089_28
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28651..29154)
DNA (504bp) protein (168aa)
ABC transporter related protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8K7_INTC7
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADU49169.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
Displaying 28 items

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