ggKbase home page

SCNpilot_cont_1000_p_scaffold_1093

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1093_1
unknown

Not on your lists

3..140
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1093_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166..861)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4L6_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47811.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1093_3
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(952..1365)
DNA (414bp) protein (138aa)
nitroreductase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000382B6EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI10639.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1093_4
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1434..2030
DNA (597bp) protein (199aa)
Prolyl aminopeptidase (EC:3.4.11.5)
Prolyl aminopeptidase {ECO:0000313|EMBL:AEE47803.1}; EC=3.4.11.5 {ECO:0000313|EMBL:AEE47803.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Prolyl aminopeptidase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4K8_CELFA
SCNpilot_cont_1000_p_scaffold_1093_5
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2006..2644
DNA (639bp) protein (213aa)
Alpha/beta hydrolase fold protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFU5_CELFN
Alpha/beta hydrolase {ECO:0000313|EMBL:KGM02218.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_p_scaffold_1093_6
Streptomyces sp. HCCB10043, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2697..3797)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037031DF
Putative transmembrane transport protein {ECO:0000313|EMBL:ESU47320.1}; TaxID=1396518 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HCCB10043.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1093_7
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3794..4870)
DNA (1077bp) protein (359aa)
Transmembrane transport protein n=2 Tax=Streptomyces RepID=D6AQW3_STRFL
Uncharacterized protein {ECO:0000313|EMBL:EWS94790.1}; TaxID=457430 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NRRL 11379.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1093_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4867..5748)
DNA (882bp) protein (294aa)
ABC transporter related protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PRG0_KRIFD rbh
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB34878.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
SCNpilot_cont_1000_p_scaffold_1093_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5745..6149)
DNA (405bp) protein (135aa)
GntR family transcriptional regulator n=1 Tax=Nocardiopsis halotolerans RepID=UPI00034632DD
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB49315.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_1000_p_scaffold_1093_10
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6314..6778)
DNA (465bp) protein (155aa)
NrdI protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG76_CELFN
NrdI protein; K03647 protein involved in ribonucleotide reduction
NrdI protein {ECO:0000313|EMBL:ADG73059.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1093_11
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6907..7407
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5ULR5_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG76021.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1093_12
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7483..7902
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00035F3194
Uncharacterized protein {ECO:0000313|EMBL:GAD82554.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
SCNpilot_cont_1000_p_scaffold_1093_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7899..8417)
DNA (519bp) protein (173aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MZV1_9CLOT
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGF56882.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
SCNpilot_cont_1000_p_scaffold_1093_14
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8430..8915)
DNA (486bp) protein (162aa)
Flavodoxin n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PCD8_9DELT
Flavodoxin domain protein {ECO:0000313|EMBL:CQD03216.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
flavodoxin
SCNpilot_cont_1000_p_scaffold_1093_15
unknown

Not on your lists

9144..9350
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1093_16
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9504..10940
DNA (1437bp) protein (479aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BGB7_SANKS rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component {ECO:0000313|EMBL:ACZ23634.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_1000_p_scaffold_1093_17
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10995..12017)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003699AB0 rbh
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYR63808.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) rbh
SCNpilot_cont_1000_p_scaffold_1093_18
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12168..12857)
DNA (690bp) protein (230aa)
ABC transporter permease n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F6D112
ABC transporter permease {ECO:0000313|EMBL:KGM15337.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
proline/glycine betaine ABC transporter permease; K05846 osmoprotectant transport system permease protein
SCNpilot_cont_1000_p_scaffold_1093_19
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12854..13510)
DNA (657bp) protein (219aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BGC5_SANKS
Quaternary ammonium transporter {ECO:0000313|EMBL:KGM15338.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
proline/glycine betaine ABC transporter permease; K05846 osmoprotectant transport system permease protein
SCNpilot_cont_1000_p_scaffold_1093_20
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13571..14596
DNA (1026bp) protein (342aa)
ABC transporter related protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1H6_CELGA
Uncharacterized protein {ECO:0000313|EMBL:KGM15339.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ABC transporter related protein; K05847 osmoprotectant transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_1093_21
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14613..15137
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3F854_9ACTO
Chorismate synthase {ECO:0000313|EMBL:KGM14931.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1093_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15134..15481
DNA (348bp) protein (116aa)
hypothetical protein id=7719777 bin=CNBR_ACT species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAU67105.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1093_23
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15565..16302)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003787634
Methyltransferase FkbM
Methyltransferase FkbM {ECO:0000313|EMBL:EFE84512.2}; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
SCNpilot_cont_1000_p_scaffold_1093_24
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16366..17136)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B369E8
Uncharacterized protein {ECO:0000313|EMBL:KHL04023.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
ABC transporter; K09686 antibiotic transport system permease protein
SCNpilot_cont_1000_p_scaffold_1093_25
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17129..17908)
DNA (780bp) protein (260aa)
Nod factor export ATP-binding protein I {ECO:0000313|EMBL:CCH76885.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCH76885.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ABC transporter n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6E09E
phosphonate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_1093_26
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18012..18329)
DNA (318bp) protein (106aa)
Regulatory protein ArsR n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H871_CELFA
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEE44628.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1093_27
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18512..19567
DNA (1056bp) protein (352aa)
Permease n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H872_CELFA rbh
Membrane protein {ECO:0000313|EMBL:KGM17014.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
permease; K07089 rbh
SCNpilot_cont_1000_p_scaffold_1093_28
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19594..19836
DNA (243bp) protein (81aa)
Redox-active disulfide protein 2 n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A402_CELGA
Redox-active disulfide protein 2 {ECO:0000313|EMBL:KGM17800.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
redox-active disulfide protein 2
SCNpilot_cont_1000_p_scaffold_1093_29
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

19859..20992
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037941EC rbh
C4-dicarboxylate transporter/malic acid transport family protein
Tax=BJP_IG2157_Actinomycetales_63_19
SCNpilot_cont_1000_p_scaffold_1093_30
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21301..21723
DNA (423bp) protein (141aa)
Putative transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2XP99_9MICO
Putative transcriptional regulator {ECO:0000313|EMBL:GAD34860.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCF34.04; TetR family transcriptional regulator
Displaying items 1-30 of 37 in total

View Taxonomy