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SCNpilot_cont_1000_p_scaffold_1110

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1110_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..607
DNA (606bp) protein (202aa)
hypothetical protein, partial n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000381BAEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG76286.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1110_2
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(611..1012)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F7D3EC
Membrane protein {ECO:0000313|EMBL:KGM11659.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein; K08972 putative membrane protein
SCNpilot_cont_1000_p_scaffold_1110_3
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1137..2219
DNA (1083bp) protein (361aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
Putative phenylalanine aminotransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H683_CELFA rbh
SCNpilot_cont_1000_p_scaffold_1110_4
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2232..3059)
DNA (828bp) protein (276aa)
AraC family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI0003759DAA
Uncharacterized protein {ECO:0000313|EMBL:KGM15170.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
transcription activator, effector binding
SCNpilot_cont_1000_p_scaffold_1110_5
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3282..4412
DNA (1131bp) protein (377aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:ADG76261.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ADG76261.1};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCM6_CELFN
SCNpilot_cont_1000_p_scaffold_1110_6
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4409..5458
DNA (1050bp) protein (350aa)
transketolase central region; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase central region n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H686_CELFA
Transketolase central region {ECO:0000313|EMBL:AEE44398.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_7
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5471..6961
DNA (1491bp) protein (497aa)
Dihydrolipoyllysine-residue acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:AEI13580.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AEI13580.1};; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A7P7_CELGA
SCNpilot_cont_1000_p_scaffold_1110_8
unknown

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comp(6958..8019)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1110_9
unknown

Not on your lists

comp(8016..9200)
DNA (1185bp) protein (395aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1110_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9252..9647)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H688_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44400.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9651..10067)
DNA (417bp) protein (139aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H689_CELFA
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEE44401.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10208..10825
DNA (618bp) protein (206aa)
Copper resistance protein CopC n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCM2_CELFN
Uncharacterized protein {ECO:0000313|EMBL:KGM02039.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
copper resistance protein CopC; K07156
SCNpilot_cont_1000_p_scaffold_1110_13
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10835..12883
DNA (2049bp) protein (683aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UCL8_CELFN
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein; K02351 putative membrane protein; K07245 putative copper resistance protein D
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:ADG76253.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1110_14
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12917..13039)
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY58_BEUC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACQ80958.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_cont_1000_p_scaffold_1110_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13226..13600)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEG1_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82966.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCNpilot_cont_1000_p_scaffold_1110_16
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13642..15681
DNA (2040bp) protein (680aa)
WD40-like beta Propeller containing protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A787_CELGA rbh
hypothetical protein rbh
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AEI13574.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1110_17
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15772..17127
DNA (1356bp) protein (452aa)
Diguanylate cyclase with GAF sensor n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6A1_CELFA rbh
diguanylate cyclase with GAF sensor rbh
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:AEE44413.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_18
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17305..19632)
DNA (2328bp) protein (776aa)
NHL repeat containing protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1VCQ6_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KGM10325.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
thiol-disulfide isomerase-like thioredoxin
SCNpilot_cont_1000_p_scaffold_1110_19
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19827..20879)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6A74B
Uncharacterized protein {ECO:0000313|EMBL:EYR63750.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1110_20
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20997..22277)
DNA (1281bp) protein (427aa)
RNA methylase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6A6_CELFA
Uncharacterized protein {ECO:0000313|EMBL:KGM03704.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
RNA methylase
SCNpilot_cont_1000_p_scaffold_1110_21
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22663..23265)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A781_CELGA
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEI13568.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1110_22
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23298..24221
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGA3_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73086.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1110_23
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24218..24751
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H6B9_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44431.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_24
unknown

Not on your lists

comp(24752..25165)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1110_25
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25249..26136)
DNA (888bp) protein (296aa)
Branched-chain amino acid aminotransferase (EC:4.1.3.38)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI0003668A5C
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KGJ80791.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
SCNpilot_cont_1000_p_scaffold_1110_26
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26345..27463)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D6660D rbh
NADH:flavin oxidoreductase/NADH oxidase rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:AEI13132.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1110_27
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27506..27928)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z723_STRSW
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KKB13320.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein; K04750 PhnB protein
SCNpilot_cont_1000_p_scaffold_1110_28
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28307..29032
DNA (726bp) protein (242aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FTS7_ISOV2
Hydrolase {ECO:0000313|EMBL:KGM14365.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
HAD-superfamily hydrolase
SCNpilot_cont_1000_p_scaffold_1110_29
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29126..29611)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4K5_CELFA
hypothetical protein; K06966
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47800.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1110_30
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29608..30237)
DNA (630bp) protein (210aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBV5_CELFN
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ADG76114.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Displaying items 1-30 of 38 in total

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