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SCNpilot_cont_1000_p_scaffold_1468

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1468_1
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

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2..343
DNA (342bp) protein (114aa)
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Ribonucleoside-diphosphate reductase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W654_KINRD
SCNpilot_cont_1000_p_scaffold_1468_2
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

376..1353
DNA (978bp) protein (326aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHU1_CELFN rbh
SCNpilot_cont_1000_p_scaffold_1468_3
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1528..2820
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00036649DC
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:ERK69434.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
oxidoreductase FAD/NAD(P)-binding rbh
SCNpilot_cont_1000_p_scaffold_1468_4
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2873..3388
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003728AE6
FMN-binding domain-containing protein
FMN-binding domain protein {ECO:0000313|EMBL:ACU74999.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
SCNpilot_cont_1000_p_scaffold_1468_5
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3390..4154
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI0003724C84
Thiamine biosynthesis protein {ECO:0000313|EMBL:AJK58101.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
apbE; thiamine biosynthesis lipoprotein
SCNpilot_cont_1000_p_scaffold_1468_6
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4294..5052)
DNA (759bp) protein (253aa)
Aminoglycoside phosphotransferase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2Y2_CELFA
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEE47600.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1468_7
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5185..5934)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHX0_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73394.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1468_8
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6059..8020
DNA (1962bp) protein (654aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2H8_CELFA rbh
ECF subfamily RNA polymerase sigma-24 subunit rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE47598.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1468_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8169..8849)
DNA (681bp) protein (227aa)
uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] rbh
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
Uracil phosphoribosyltransferase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHX3_CELFN rbh
SCNpilot_cont_1000_p_scaffold_1468_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8980..9444
DNA (465bp) protein (155aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2H5_CELFA
CMP/dCMP deaminase zinc-binding protein
SCNpilot_cont_1000_p_scaffold_1468_11
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9434..10288)
DNA (855bp) protein (285aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
NAD-dependent protein deacetylase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5V8_CELGA
Silent information regulator protein Sir2
SCNpilot_cont_1000_p_scaffold_1468_12
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10509..11486)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00035DDBA7
Oxidoreductase, zinc-binding dehydrogenase family {ECO:0000313|EMBL:EMQ99153.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
NADPH:quinone reductase
SCNpilot_cont_1000_p_scaffold_1468_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11608..11964
DNA (357bp) protein (119aa)
Glyoxalase family protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RSZ5_PROA4
Glyoxalase {ECO:0000313|EMBL:KDA06743.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Glyoxalase family protein
SCNpilot_cont_1000_p_scaffold_1468_14
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11966..12694)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A4K0_CELGA
Uncharacterized protein {ECO:0000313|EMBL:EYR63652.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1468_15
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12861..14159)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002DACBC1
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47565.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1468_16
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14291..15616
DNA (1326bp) protein (442aa)
Nitrate reductase n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1ZAC6_9BACI rbh
Nitrate reductase {ECO:0000313|EMBL:ERI44193.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
uracil-xanthine permease rbh
SCNpilot_cont_1000_p_scaffold_1468_17
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15685..16272)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002D9C4A8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI13369.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1468_18
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16311..16712)
DNA (402bp) protein (134aa)
transcription regulator of the Arc/MetJ class n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000371C2A4
Uncharacterized protein {ECO:0000313|EMBL:KGM16411.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1468_19
unknown

Not on your lists

comp(16700..17278)
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1468_20
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17333..18136
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BZH0_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ30124.1}; Flags: Precursor;; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_1468_21
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18133..18501
DNA (369bp) protein (123aa)
Transcriptional regulator, GntR family n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BZH1_XYLCX
GntR family transcriptional regulator {ECO:0000313|EMBL:KGM14876.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1468_22
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18481..19200)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000368571E
Uncharacterized protein {ECO:0000313|EMBL:KGM14205.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1468_23
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19354..19761)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036181B6
Glyoxalase-like domain {ECO:0000313|EMBL:KJE19583.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1468_24
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19876..20751)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E8C6C3
Uncharacterized protein {ECO:0000313|EMBL:KGM14776.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
oxidoreductase
SCNpilot_cont_1000_p_scaffold_1468_25
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20928..22256
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003702B8D rbh
Putative Peptidase S8 and S53 {ECO:0000313|EMBL:CCH77666.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1468_26
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

22341..23300
DNA (960bp) protein (320aa)
Putative F420-dependent oxidoreductase id=4833076 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative F420-dependent oxidoreductase
Tax=RBG_16_RIF_CHLX_70_13_curated
SCNpilot_cont_1000_p_scaffold_1468_27
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23297..25867)
DNA (2571bp) protein (857aa)
ABC transporter related protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BZE8_XYLCX
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ30102.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
SCNpilot_cont_1000_p_scaffold_1468_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25864..26790)
DNA (927bp) protein (309aa)
Multidrug ABC transporter ATP-binding protein/permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XL57_9MICO
Multidrug ABC transporter ATP-binding protein/permease protein {ECO:0000313|EMBL:GAD33717.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial
Displaying 28 items

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