ggKbase home page

SCNpilot_cont_1000_p_scaffold_1510

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1510_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..306
DNA (306bp) protein (102aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGM1_CELFN
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ADG75119.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_2
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(434..1066)
DNA (633bp) protein (211aa)
Diguanylate phosphodiesterase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3F0_CELFA
diguanylate phosphodiesterase; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains
Diguanylate phosphodiesterase {ECO:0000313|EMBL:AEE46495.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1134..1862)
DNA (729bp) protein (243aa)
Diguanylate phosphodiesterase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGL9_CELFN rbh
diguanylate phosphodiesterase; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ADG75117.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_4
unknown

Not on your lists

2061..2189
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1510_5
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2272..3591
DNA (1320bp) protein (440aa)
Helix-turn-helix domain protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3E7_CELFA
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEE46492.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_6
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(3661..3921)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1Z299_9BACI
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
SCNpilot_cont_1000_p_scaffold_1510_7
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4039..4566)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003721A24
Uncharacterized protein {ECO:0000313|EMBL:KGM02379.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1510_8
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4725..6299
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E3B90A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75112.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_9
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6293..7222
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGL3_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75111.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_10
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7237..8061
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E30E4D
transglutaminase domain protein
Transglutaminase domain protein {ECO:0000313|EMBL:AEI11741.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1510_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8104..8802)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3E1_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46486.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8804..10801
DNA (1998bp) protein (666aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
elongation factor 4 n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003760850
GTP-binding protein LepA; K03596 GTP-binding protein LepA
SCNpilot_cont_1000_p_scaffold_1510_13
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10843..11847)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037DF819 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KGM17218.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
NADP-dependent aryl-alcohol dehydrogenase rbh
SCNpilot_cont_1000_p_scaffold_1510_14
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11918..12301)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4A5_STREN
Uncharacterized protein {ECO:0000313|EMBL:KGM17217.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1510_15
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12370..13602
DNA (1233bp) protein (411aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
coproporphyrinogen III oxidase n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000316A55F rbh
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEE46483.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_16
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13609..14091)
DNA (483bp) protein (161aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2A974_9BACI
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
SCNpilot_cont_1000_p_scaffold_1510_17
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14185..14850)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000381C8DC
Uncharacterized protein {ECO:0000313|EMBL:KGM11855.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein; K09940 hypothetical protein
SCNpilot_cont_1000_p_scaffold_1510_18
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15006..16064
DNA (1059bp) protein (353aa)
Integral membrane protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H3D5_CELFA
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AEE46480.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_19
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16061..16912)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2Y0_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE46479.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_20
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16988..18478
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037A157C rbh
MFS transporter {ECO:0000313|EMBL:KDP90482.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
EmrB/QacA subfamily drug resistance transporter rbh
SCNpilot_cont_1000_p_scaffold_1510_21
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18539..19564
DNA (1026bp) protein (342aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGK3_CELFN
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_22
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19498..24471)
DNA (4974bp) protein (1658aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:ADG75098.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ADG75098.1};; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
pyruvate, phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate, phosphate dikinase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGK0_CELFN
SCNpilot_cont_1000_p_scaffold_1510_23
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24669..25712
DNA (1044bp) protein (348aa)
phosphate starvation protein PhoH n=1 Tax=Cellulomonas sp. JC225 RepID=UPI000301B93E rbh
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
PhoH family protein {ECO:0000313|EMBL:ADG75097.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_1000_p_scaffold_1510_24
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25709..26161
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; Flags: Precursor;; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
heat-shock protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002E06B3F
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_cont_1000_p_scaffold_1510_25
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26207..27487
DNA (1281bp) protein (427aa)
CBS domain containing protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A1V0_CELGA rbh
CBS domain containing protein rbh
CBS domain containing protein {ECO:0000313|EMBL:AEI11757.1}; Flags: Precursor;; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_p_scaffold_1510_26
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27484..28407
DNA (924bp) protein (308aa)
GTPase Era n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2X2_CELFA
GTP-binding protein Era; K03595 GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_27
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28408..30018
DNA (1611bp) protein (537aa)
Dienelactone hydrolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H2X1_CELFA
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:AEE46470.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_p_scaffold_1510_28
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30015..31811)
DNA (1797bp) protein (599aa)
glycoside hydrolase n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003B35CA3
Glycoside hydrolase {ECO:0000313|EMBL:EYT66040.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
glycoside hydrolase
SCNpilot_cont_1000_p_scaffold_1510_29

Not on your lists

comp(31792..33150)
DNA (1359bp) protein (453aa)
Glycosyl hydrolase family 1 n=1 Tax=uncultured organism RepID=T1WBJ0_9ZZZZ rbh
Glycosyl hydrolase family 1 {ECO:0000313|EMBL:AGU11894.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
SCNpilot_cont_1000_p_scaffold_1510_30

Not on your lists

comp(33147..34010)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003736F17
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:AGU11893.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
Displaying items 1-30 of 36 in total

View Taxonomy